Characterization of codon usage pattern and influencing factors in Japanese encephalitis virus
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- 作者：Niraj K. Singha ; nirajvet57@gmail.com" class="auth_mail" title="E-mail the corresponding author ; Anuj Tyagib ; Rajinder Kaura ; Ramneek Vermaa ; Praveen K. Guptac
- 关键词：Japanese encephalitis virus ; Codon usage bias ; Mutational pressure ; Natural selection
- 刊名：Virus Research
- 出版年：2016
- 出版时间：2 August 2016
- 年：2016
- 卷：221
- 期：Complete
- 页码：58-65
- 全文大小：1712 K
文摘
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Low codon usage bias was observed in various geographical isolates of Japanese Encephalitis Virus (JEV).
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The low codon usage bias of JEV may allow it to replicate more efficiently in the host.
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Both Natural selection and mutational pressure influenced the codon usage patterns in JEV.
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Relative dinucleotide frequencies and geographical distribution influenced the codon usage pattern to some extent.