Large-Scale Quantum-Mechanical Molecular Dynamics Simulations Using Density-Functional Tight-Binding Combined with the Fragment Molecular Orbital Method

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• 作者：Yoshio Nishimoto ; Hiroya Nakata ; Dmitri G. Fedorov ; Stephan Irle
• 刊名：The Journal of Physical Chemistry Letters
• 出版年：2015
• 出版时间：December 17, 2015
• 年：2015
• 卷：6
• 期：24
• 页码：5034-5039
• 全文大小：394K
• ISSN：1948-7185

文摘

The fully analytic gradient is developed for density-functional tight-binding (DFTB) combined with the fragment molecular orbital (FMO) method (FMO-DFTB). The response terms arising from the coupling of the electronic state to the embedding potential are derived, and the gradient accuracy is demonstrated on water clusters and a polypeptide. The radial distribution functions (RDFs) obtained with FMO-DFTB are found to be similar to those from conventional DFTB, while the computational cost is greatly reduced; for 256 water molecules one molecular dynamics (MD) step takes 73.26 and 0.68 s with full DFTB and FMO-DFTB, respectively, showing a speed-up factor of 108. FMO-DFTB/MD is applied to 100 ps MD simulations of liquid hydrogen halides and is found to reproduce experimental RDFs reasonably well.