Recent evidence suggests that the prion protein (PrP) is a copper binding protein. The N-terminalregion of human PrP contains four sequential copies of the highly conserved octarepeat sequencePHGGGWGQ spanning residues 60-91. This region selectively binds Cu
2+ in vivo. In a previous studyusing peptide design, EPR, and CD spectroscopy, we showed that the HGGGW segment within eachoctarepeat comprises the fundamental Cu
2+ binding unit [Aronoff-
Spencer et al. (2000)
Biochemistry 40,13760-13771]. Here we present the first atomic resolution view of the copper binding site within anoctarepeat. The crystal structure of HGGGW in a complex with Cu
2+ reveals equatorial coordination bythe histidine imidazole, two deprotonated glycine amides, and a glycine carbonyl, along with an axialwater bridging to the Trp indole. Companion S-band EPR, X-band ESEEM, and HYSCORE experimentsperformed on a library of
15N-labeled peptides indicate that the structure of the copper binding site inHGGGW and PHGGGWGQ in solution is consistent with that of the crystal structure. Moreover, EPRperformed on PrP(23-28, 57-91) and an
15N-labeled analogue demonstrates that the identified structureis maintained in the full PrP octarepeat domain. It has been shown that copper stimulates PrP endocytosis.The identified Gly-Cu linkage is unstable below pH
6.5 and thus suggests a pH-dependent molecularmechanism by which PrP detects Cu
2+ in the extracellular matrix or releases PrP-bound Cu
2+ within theendosome. The structure also reveals an unusual complementary interaction between copper-structuredHGGGW units that may facilitate molecular recognition between prion proteins, thereby suggesting amechanism for transmembrane signaling and perhaps conversion to the pathogenic form.