用户名: 密码: 验证码:
Slow-fast stochastic diffusion dynamics and quasi-stationarity for diploid populations with varying size
详细信息    查看全文
  • 作者:Camille Coron
  • 关键词:Diploid populations ; Demographic Wright ; Fisher diffusion processes ; Stochastic slow ; fast dynamical systems ; Quasi ; stationary distributions ; Allele coexistence ; 60J10 ; 60J80 ; 60J27 ; 92D25 ; 92D15
  • 刊名:Journal of Mathematical Biology
  • 出版年:2016
  • 出版时间:January 2016
  • 年:2016
  • 卷:72
  • 期:1-2
  • 页码:171-202
  • 全文大小:861 KB
  • 参考文献:Ball K, Kurtz TG, Popovic L, Rempala G (2006) Asymptotic analysis of multiscale approximations to reaction networks. Ann Appl Probab 16(4):1925–1961MATH MathSciNet CrossRef
    Berglund N, Gentz B (2006) Noise-induced phenomena in slow-fast dynamical systems. Probability and its applications (New York). Springer-verlag, London Ltd., London
    Burdzy K, Holyst R, Ingerman D, March P (1996) Configurational transition in a fleming-viot-type model and probabilistic interpretation of laplacian eigenfunctions. J Phys A 29(11):2633–2642MATH CrossRef
    Cattiaux P, Collet P, Lambert A, Martínez S, Méléard S, San Martín J (2009) Quasi-stationary distributions and diffusion models in population dynamics. Ann Probab 37(5):1926–1969MATH MathSciNet CrossRef
    Cattiaux P, Méléard S (2010) Competitive or weak cooperative stochastic Lotka-Volterra systems conditioned on non-extinction. J Math Biol 60(6):797–829MATH MathSciNet CrossRef
    Champagnat N (2006) A microscopic interpretation for adaptive dynamics trait substitution sequence models. Stochastic Process Appl 116(8):1127–1160MATH MathSciNet CrossRef
    Champagnat N, Ferrière R, Méléard S (2006) Unifying evolutionary dynamics: from individual stochastic processes to macroscopic models. Theor Popul Biol 69:297–321MATH CrossRef
    Champagnat N, Méléard S (2007) Invasion and adaptive evolution for individual-based spatially structured populations. J Math Biol 55:147–188MATH MathSciNet CrossRef
    Collet P, Méléard S, Metz JA (2013) A rigorous model study of the adaptive dynamics of Mendelian diploids. J Math Biol 67(3):569–607MATH MathSciNet CrossRef
    Coron C (2014) Stochastic modeling of density-dependent diploid populations and extinction vortex. Adv Appl Probab 46:446–477MATH MathSciNet CrossRef
    Crow JF, Kimura M (1970) An introduction to population genetics theory. Harper & Row Publishers, New YorkMATH
    Depperschmidt A, Greven A, Pfaffelhuber P (2012) Tree-valued Fleming-Viot dynamics with mutation and selection. Ann Appl Probab 22(6):2560–2615MATH MathSciNet CrossRef
    Ethier SN, Kurtz TG (1986) Markov processes. Characterization and convergence. Wiley Series in Probability and Mathematical Statistics: Probability and Mathematical Statistics. Wiley, New York
    Ethier SN, Nagylaki T (1980) Diffusion approximations of markov chains with two time scales and applications to population genetics. Adv App Probab 12(1):14–49MATH MathSciNet CrossRef
    Ethier SN, Nagylaki T (1988) Diffusion approximations of markov chains with two time scales and applications to population genetics, ii. Adv App Probab 20(3):525–545MATH MathSciNet CrossRef
    Foucart C, Hénard O (2013) Stable continuous-state branching processes with immigration and beta-fleming-viot processes with immigration. Electron J Probab 18(23):1–21MathSciNet
    Fournier N, Méléard S (2004) A microscopic probabilistic description of a locally regulated population and macroscopic approximations. Ann Appl Probab 14(4):1880–1919MATH MathSciNet CrossRef
    Hofbauer J, Schuster P, Sigmund K (1982) Game dynamics in mendelian populations. Biol Cybernetics 43(1):51–57MATH MathSciNet CrossRef
    Hofbauer J, Sigmund K (1998) Evolutionary games and population genetics. Cambridge University Press, CambridgeCrossRef
    Hoppensteadt F (1975) Mathematical theories of populations: demographics, genetics and epidemics. Regional conference series in applied mathematics. Society for Industrial and Applied Mathematics
    Joffe A, Métivier M (1986) Weak convergence of sequences of semimartingales with applications to multitype branching processes. Adv Appl Probab 18(1):20–65MATH CrossRef
    Katzenberger GS (1991) Solutions of a stochastic differential equation forced onto a manifold by a large drift. Ann Probab 19(4):1587–1628MATH MathSciNet CrossRef
    Kurtz TG (1992) Averaging for martingale problems and stochastic approximation. In: Applied stochastic analysis (New Brunswick, NJ, 1991), volume 177 of Lecture Notes in Control and Inform Sci, pp 186–209. Springer, Berlin
    Méléard S, Tran VC (2012) Slow and fast scales for superprocess limits of age-structured populations. Stochastic Process Appl 122(1):250–276MATH MathSciNet CrossRef
    Méléard S, Villemonais D (2012) Quasi-stationary distributions and population processes. Probab Surv 9:340–410MATH MathSciNet CrossRef
    Nagylaki T (1992) Introduction to theoretical population genetics. Springer, BerlinMATH CrossRef
    Nagylaki T, Crow J (1974) Continuous selective models. Theor Popul Biol 5:257–283MATH CrossRef
    Norton H (1928) Natural selection and mendelian variation. Proc Lond Math Soc 2(1):1–45MathSciNet CrossRef
    Papanicolaou GC, Stroock D, Varadhan SRS (1977) Martingale approach to some limit theorems. In: Papers from the Duke Turbulence Conference (Duke Univ., Durham, N.C., 1976), Paper No. 6, pp ii+120. Duke Univ. Math. Ser., Vol. III. Duke Univ., Durham, N.C
    Pardoux E, Wakolbinger A (2014) A path-valued markov process indexed by the ancestral mass. Arxiv:​1411.​2526
    Pinsky RG (1995) Positive harmonic functions and diffusion, volume 45 of Cambridge Studies in Advanced Mathematics. Cambridge University Press, CambridgeCrossRef
    Stroock DW, Varadhan SRS (1979) Multidimensional diffusion processes, volume 233 of Grundlehren der Mathematischen Wissenschaften [Fundamental Principles of Mathematical Sciences]. Springer, Berlin
    Villemonais D (2011) Interacting particle systems and Yaglom limit approximation of diffusions with unbounded drift. Electron J Probab 16(61):1663–1692MATH MathSciNet
    Villemonais D (2013) General approximation method for the distribution of markov processes conditioned not to be killed. ESAIM: Probability and Statistics, eFirst
  • 作者单位:Camille Coron (1)

    1. Laboratoire de Mathématiques d’Orsay UMR 8628, Université Paris-Sud, Bâtiment 425, 91405, Orsay-Cédex, France
  • 刊物类别:Mathematics and Statistics
  • 刊物主题:Mathematics
    Mathematical Biology
    Applications of Mathematics
  • 出版者:Springer Berlin / Heidelberg
  • ISSN:1432-1416
文摘
We are interested in the long-time behavior of a diploid population with sexual reproduction and randomly varying population size, characterized by its genotype composition at one bi-allelic locus. The population is modeled by a 3-dimensional birth-and-death process with competition, weak cooperation and Mendelian reproduction. This stochastic process is indexed by a scaling parameter \(K\) that goes to infinity, following a large population assumption. When the individual birth and natural death rates are of order \(K\), the sequence of stochastic processes indexed by \(K\) converges toward a new slow-fast dynamics with variable population size. We indeed prove the convergence toward 0 of a fast variable giving the deviation of the population from quasi Hardy–Weinberg equilibrium, while the sequence of slow variables giving the respective numbers of occurrences of each allele converges toward a 2-dimensional diffusion process that reaches (0,0) almost surely in finite time. The population size and the proportion of a given allele converge toward a Wright-Fisher diffusion with stochastically varying population size and diploid selection. We insist on differences between haploid and diploid populations due to population size stochastic variability. Using a non trivial change of variables, we study the absorption of this diffusion and its long time behavior conditioned on non-extinction. In particular we prove that this diffusion starting from any non-trivial state and conditioned on not hitting (0,0) admits a unique quasi-stationary distribution. We give numerical approximations of this quasi-stationary behavior in three biologically relevant cases: neutrality, overdominance, and separate niches. Keywords Diploid populations Demographic Wright-Fisher diffusion processes Stochastic slow-fast dynamical systems Quasi-stationary distributions Allele coexistence

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700