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Evidence of cell surface iron speciation of acidophilic iron-oxidizing microorganisms in indirect bioleaching process
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  • 作者:Zhen-yuan Nie ; Hong-chang Liu ; Jin-lan Xia ; Yi Yang ; Xiang-jun Zhen…
  • 关键词:Synchrotron radiation ; Iron ; oxidizing microorganism ; Iron speciation ; In situ ; Bioleaching
  • 刊名:Biometals
  • 出版年:2016
  • 出版时间:February 2016
  • 年:2016
  • 卷:29
  • 期:1
  • 页码:25-37
  • 全文大小:1,706 KB
  • 参考文献:Bonnefoy V (2010) Bioinformatics and genomics of iron- and sulfur-oxidizing acidophiles. In: Barton LL, Mandl M, Loy A (eds) Geomicrobiology: molecular and environmental perspective. Springer, Berlin, pp 169–192CrossRef
    Brierley CL (2010) Biohydrometallurgical prospects. Hydrometallurgy 104:324–328CrossRef
    Chi A, Valenzuela L, Beard S, Mackey AJ, Shabanowitz J, Hunt DF, Jerez C (2007) Periplasmic proteins of the extremophile Acidithiobacillus ferrooxidans. Mol Cell Proteomics 6:2239–2251CrossRef PubMedCentral PubMed
    Crundwell FK (2003) How do bacteria interact with minerals? Hydrometallurgy 71:75–81CrossRef
    Ding JN, Gao J, Wu XL, Zhang CG, Wang DZ, Qiu GZ (2007) Jarosite-type precipitates mediated by YN22, Sulfobacillus thermosulfidooxidans, and their influences on strain. Trans Nonferrous Met Soc China 17:1038–1044CrossRef
    Emerson D, Fleming EJ, McBeth JM (2010) Iron-oxidizing bacteria: an environmental and genomic perspective. Annu Rev Microbiol 64:561–583CrossRef PubMed
    Flemming HC, Wingnder J (2010) The biofilm matrix. Nat Rev Microbiol 8:623–633PubMed
    Gehrke T, Telegdi J, Thierry D, Sand W (1998) Importance of extracellular polymeric substances from Thiobacillus ferrooxidans for bioleaching. Appl Environ Microbiol 64:2743–2747PubMedCentral PubMed
    He H, Xia JL, Jiang HC, Yan Y, Liang CL, Ma CY, Zheng L, Zhao YD, Qiu GZ (2010) Sulfur species investigation in extra- and intracellular sulfur globules of Acidithiobacillus ferrooxidans and Acidithiobacillus caldus. Geomicrobiol J 27:707–713CrossRef
    Ide-Ektessabi A, Kawakami T, Watt F (2004) Distribution and chemical state analysis of iron in the Parkinsonian substantia nigra using synchrotron radiation micro beams. Nucl Instrum Meth B 213:590–594CrossRef
    Katsikini M, Pinakidou F, Mavromati E, Paloura EC, Gioulekas D, Grolimund D (2010) Fe distribution and speciation in human nails. Nucl Instrum Meth B 268:420–424CrossRef
    Lai B, Yun W, Xiao Y, Yang L, Legnini D, Cai Z, Krasnoperova A, Cerrina F, DiFabrizio E, Grella L, Gentili M (1995) Development of a hard x-ray imaging microscope. Rev Sci Instrum 66:2287–2289CrossRef
    Li Y, Kawashima N, Li J, Chandra AP, Gerson AR (2013) A review of the structure, and fundamental mechanisms and kinetics of the leaching of chalcopyrite. Adv Colloid Interface 197–198:1–32
    Liu HC, Xia JL, Nie ZY, Peng AA, Ma CY, Zheng L, Zhao YD (2013) Comparative study of sulfur utilization and speciation transformation of two elemental sulfur species by thermoacidophilic Archaea Acidianus manzaensis YN-25. Process Biochem 48:1855–1860CrossRef
    Lobinski R, Moulin C, Ortega R (2006) Imaging and speciation of trace elements in biological environment. Biochimie 88:1591–1604CrossRef PubMed
    Melcher F, Oberthür T, Rammlmair D (2006) Geochemical and mineralogical distribution of germanium in the Khusib Springs Cu–Zn–Pb–Ag sulfide deposit, Otavi Mountain Land, Namibia. Ore Geol Rev 28:32–56CrossRef
    Mosselmans J, Pattrick R, Van der Laan G, Charnock J, Vaughan D, Henderson C, Garner CD (1995) X-ray absorption near-edge spectra of transition metal disulfides FeS2 (pyrite and marcasite), CoS2, NiS2 and CuS2, and their isomorphs FeAsS and CoAsS. Phys Chem Miner 22:311–317CrossRef
    Nie ZY, Liu HC, Xia JL, Zhu HR, Ma CY, Zheng L, Zhao YD, Qiu GZ (2014) Differential utilization and transformation of sulfur allotropes, μ-S and α-S8, by moderate thermoacidophile Sulfobacillus thermosulfidooxidans. Res Microbiol 165:639–646CrossRef PubMed
    Peng AA, Xia JL, Liu HC, Nie ZY, Yang Y, Zhu W (2014) Differential utilization of cyclic, orthorhombic α and chain-like polymeric μ-sulfur by Acidithiobacillus ferrooxidans. Trans Nonferrous Met Soc China 24:1562–1570CrossRef
    Pradhan N, Nathsarma KC, Srinivasa Rao K, Sukla LB, Mishra BK (2008) Heap bioleaching of chalcopyrite: a review. Miner Eng 21:355–365CrossRef
    Prange A (2008) Speciation analysis of microbiologically produced sulfur by X-ray absorption near edge structure spectroscopy. In: Dahl C, Friedrich C (eds) Microbial sulfur metabolism. Springer, Berlin, pp 259–272CrossRef
    Quatrini R, Appia-Ayme C, Denis Y, Jedlicki E, Holmes DS, Bonnefoy V (2009) Extending the models for iron and sulfur oxidation in the extreme Acidophile Acidithiobacillus ferrooxidans. BMC Genom 10:394CrossRef
    Ravel B, Newville M (2005) ATHENA, ARTEMIS, HEPHAESTUS: data analysis for X-ray absorption spectroscopy using IFEFFIT. J Synchrotron Radiat 12:537–541CrossRef PubMed
    Sand W, Gehrke T (2006) Extracellular polymeric substances mediate bioleaching/biocorrosion via interfacial processes involving iron (III) ions and acidophilic bacteria. Res Microbiol 157:49–56CrossRef PubMed
    Sand W, Gehrke T, Hallmann R, Schippers A (1995) Sulfur chemistry, biofilm, and the (in)direct attack mechanism—a critical evaluation of bacterial leaching. Appl Microbiol Biotechnol 43:961–966CrossRef
    Schippers A, Sand W (1999) Bacterial leaching of metal sulfides proceeds by two indirect mechanisms via thiosulfate or via polysulfides and sulfur. Appl Microbiol Biotechnol 65:319–321
    Thole B, Van der Laan G (1988) Branching ratio in x-ray absorption spectroscopy. Phys Rev B 38:3158CrossRef
    Valdés J, Pedroso I, Quatrini R, Dodson RJ, Tettelin H, Blake R, Eisen JA, Holmes DS (2008) Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. BMC Genom 9:597CrossRef
    Van Aken P, Liebscher B (2002) Quantification of ferrous/ferric ratios in minerals: new evaluation schemes of Fe L 23 electron energy-loss near-edge spectra. Phys Chem Miner 29:188–200CrossRef
    Van der Laan G, Kirkman I (1992) The 2p absorption spectra of 3d transition metal compounds in tetrahedral and octahedral symmetry. J Phys-Condens Mat 4:4189CrossRef
    Vera M, Schippers A, Sand W (2013) Progress in bioleaching: fundamentals and mechanisms of bacterial metal sulfide oxidation—part A. Appl Microbiol Biotechnol 97:7529–7541CrossRef PubMed
    Wang HJ, Wang M, Wang B, Meng XY, Wang Y, Li M, Feng WY, Zhao YL, Chai ZF (2010) Quantitative imaging of element spatial distribution in the brain section of a mouse model of Alzheimer’s disease using synchrotron radiation X-ray fluorescence analysis. J Anal At Spectrom 25:328CrossRef
    Wang ZW, Zhang LJ, Guo Z, Liu L, Ji J, Zhang JN, Chen XH, Liu BY, Zhang J, Ding QL, Wang XF, Zhao W, Zhu ZG, Yu YY (2012) A unique feature of iron loss via close adhesion of Helicobacter pylori to host erythrocytes. PLoS ONE 7:e50314CrossRef PubMedCentral PubMed
    Xia JL, Liu HC, Nie ZY, Peng AA, Zhen XJ, Yang Y, Zhang XL (2013) Synchrotron radiation based STXM analysis and micro-XRF mapping of differential expression of extracellular thiol groups by Acidithiobacillus ferrooxidans grown on Fe2+ and S0. J Microbiol Meth 94:257–261CrossRef
    Xue CF, Wang Y, Guo Z, Wu YQ, Zhen XJ, Chen M, Chen JH, Xue S, Peng ZQ, Lu QP, Tai RZ (2010) High-performance soft X-ray spectromicroscopy beamline at SSRF. Rev Sci Instrum 81:103502CrossRef PubMed
    Yang Y, Liu W, Chen M (2013) A copper and iron K-edge XANES study on chalcopyrite leached by mesophiles and moderate thermophiles. Miner Eng 48:31–35CrossRef
    Zhang CG, Zhang RY, Xia JL, Zhang Q, Nie ZY (2008) Sulfur activation-related extracellular proteins of Acidithiobacillus ferrooxidans. Trans Nonferrous Met Soc China 18:1398–1402CrossRef
    Zhang XZ, Xu ZJ, Tai RZ, Zhen XJ, Wang Y, Guo Z, Yan R, Chang R, Wang B, Li M, Zhao J, Gao F (2010) Ratio-contrast imaging of dual-energy absorption for element mapping with a scanning transmission X-ray microscope. J Synchrotron Radiat 17:804–809CrossRef PubMed
  • 作者单位:Zhen-yuan Nie (1) (2)
    Hong-chang Liu (1) (2)
    Jin-lan Xia (1) (2)
    Yi Yang (1) (2)
    Xiang-jun Zhen (3) (4)
    Li-juan Zhang (3) (4)
    Guan-zhou Qiu (1) (2)

    1. School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China
    2. Key Lab of Biometallurgy of Ministry of Education of China, Central South University, Changsha, 410083, China
    3. Shanghai Synchrotron Radiation Facility, Shanghai, 201800, China
    4. Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai, 201800, China
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Life Sciences
    Biochemistry
    Physical Chemistry
  • 出版者:Springer Netherlands
  • ISSN:1572-8773
文摘
While indirect model has been widely accepted in bioleaching, but the evidence of cell surface iron speciation has not been reported. In the present work the iron speciation on the cell surfaces of four typically acidophilic iron-oxidizing microorganism (mesophilic Acidithiobacillus ferrooxidans ATCC 23270, moderately thermophilic Leptospirillum ferriphilum YSK and Sulfobacillus thermosulfidooxidans St, and extremely thermophilic Acidianus manzaensis YN25) grown on different energy substrates (chalcopyrite, pyrite, ferrous sulfate and elemental sulfur (S0)) were studied in situ firstly by using synchrotron-based micro- X-ray fluorescence analysis and X-ray absorption near-edge structure spectroscopy. Results showed that the cells grown on iron-containing substrates had apparently higher surface iron content than the cells grown on S0. Both ferrous iron and ferric iron were detected on the cell surface of all tested AIOMs, and the Fe(II)/Fe(III) ratios of the same microorganism were affected by different energy substrates. The iron distribution and bonding state of single cell of A. manzaensis were then studied in situ by scanning transmission soft X-ray microscopy based on dual-energy contrast analysis and stack analysis. Results showed that the iron species distributed evenly on the cell surface and bonded with amino, carboxyl and hydroxyl groups. Keywords Synchrotron radiation Iron-oxidizing microorganism Iron speciation In situ Bioleaching

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