Ganoderma and Amauroderma species associated with root-rot disease of Acacia mangium plantation trees in Indonesia and Malaysia
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- 作者：Morag Glen (1)
Neale L. Bougher (2)
Anthony A. Francis (3)
Susan Q. Nigg (1)
Su See Lee (4)
Ragil Irianto (5)
Karen M. Barry (3)
Christopher L. Beadle (1)
Caroline L. Mohammed (1) (3) - 关键词：polypore fungi
- 刊名：Australasian Plant Pathology
- 出版年：2009
- 出版时间：July 2009
- 年：2009
- 卷：38
- 期：4
- 页码：345-356
- 全文大小：508KB
- 参考文献：1. Almonicar RS (1992) Twotypes of root rot disease affecting / Acacia mangium. Nitrogen Fixing Tree Research Reports 10, 94鈥?5.
2. Arentz F, Simpson JA (1988) Root and butt diseases of native plantation species in Papua New Guinea. In 鈥楩ifth international congress of plant pathology, Kyoto, Japan鈥?
3. Bakshi BK (1957) Fungal diseases of khair ( / Acacia catechu Willd.) and their prevention. / Indian Forester 83, 41鈥?6.
4. Barry KM, Irianto RSB, Santoso E, Turjaman M, Widyati E, Sitepu I, Mohammed CL (2004) Incidence of heartrot in harvest-age / Acacia mangium in Indonesia, using a rapid survey method. / Forest Ecology and Management 190, 273鈥?80. doi: 10.1016/j.foreco.2003.10.017 CrossRef
5. Batista MDF (1982) Red root rot of guarana. / Fitopatologia Brasileira 7, 437鈥?38.
6. Bhaskaran R, Ramadoss N, Suriachandraselvan M (1991) Pathogenicity of / Ganoderma spp. isolated from Thanjavur wilt infected coconut ( / Cocos nucifera L.). / Madras Agricultural Journal 78, 137鈥?38.
7. Boa E, Lenn茅 J (1994) 鈥楧iseases of nitrogen-fixing trees in developing countries: an annotated list.鈥?(Natural Resources Institute: Chatham, UK) 82 pp.
8. Bridge PD, O鈥橤rady EB, Pilott CA, Sanderson FR (2000) Development of molecular diagnostics for the detection of Ganoderma isolates pathogenic to oil palm. In 鈥楪anoderma diseases of perennial crops鈥? (Eds J Flood, PD Bridge, M Holderness) pp. 225鈥?34. (CABI Publishing: Wallingford, UK) CrossRef
9. CABI Biosciences (2008) Indexfungorum. Available at http://www. indexfungorum.org/Names/Names.asp [Verified 26 February 2009].
10. Corner EJH (1983) / Ad Polyporaceas I. Amauroderma and Ganoderma. / Nova Hedwigia. Beiheft 75, 1鈥?82.
11. Corner EJH (1987) Ad Polyporaceas IV. The genera / Daedalea, Flabellophora, Flavodon, Gloeophyllum, Heteroporus, Irpex, Lenzites, Microporellus, Nigrofomes, Nigroporus, Oxyporus, Paratrichaptum, Rigidoporus, Scenidium, Trichaptum, Vanderbylia and Steccherinum. Beihefte Nova Hedwigia 86, 1鈥?65.
12. Crous PW, Gams W, Stalpers JA, Robert V, Stegehuis G (2004) MycoBank: an online initiative to launch mycology into the 21st century. / Studies in Mycology 50, 19鈥?2.
13. de Oliviera ML (1993) Red root rot of cocoa caused by / Ganoderma philippii. / Agrotropica 5, 13鈥?8.
14. Felsenstein J (1989) PHYLIP 鈥?Phylogeny Inference Package (version 3.2). / Cladistics 5, 164鈥?66.
15. Flood J, Bridge PD, Holderness M (Eds) (2000) 鈥?em class="a-plus-plus">Ganoderma diseases of perennial crops.鈥?(CABI Publishing: Wallingford, UK) 275 pp.
16. Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes 鈥?application to the identification of mycorrhizae and rusts. / Molecular Ecology 2, 113鈥?18. doi: 10.1111/j.1365-294X.1993. tb00005.x CrossRef
17. Glen M, Tommerup IC, Bougher NL, O鈥橞rien PA (2001) Specificity, sensitivity and discrimination of primers for PCR-RFLP of larger basidiomycetes and their applicability to identification of ectomycorrhizal fungi in / Eucalyptus forests and plantations. / Mycological Research 105, 138鈥?49. doi: 10.1017/S0953756200003361 CrossRef
18. Glen M, Tommerup IC, Bougher NL, O鈥橞rien PA (2002) Are Sebacinaceae common and widespread ectomycorrhizal associates of / Eucalyptus species in Australian forests? / Mycorrhiza 12, 243鈥?47. doi: 10.1007/ s00572-002-0180-y CrossRef
19. Glen M, Potter K, Sulistyawati P (2006) Molecular identification of organisms associated with root and heart rot in / Acacia mangium. In 鈥楢CIAR Proceedings No. 124. Heart rot and root rot in Acacia plantations: a synthesis of research progress, 7鈥? February, Yogyakarta, Indonesia鈥? (Eds K Potter, A Rimbawanto, C Beadle) pp. 55鈥?9.
20. Gottlieb AM, Wright JE (1999) Taxonomy of / Ganoderma from southern South America: subgenus / Elfvingia. / Mycological Research 103, 1289鈥?298. doi: 10.1017/S095375629800848X CrossRef
21. Harsh NSK, Soni KK, Tiwari CK (1993) / Ganoderma root-rot in an / Acacia arboretum. / European Journal of Forest Pathology 23, 252鈥?54. doi: 10.1111/j.1439-0329.1993.tb01343.x CrossRef
22. Hong S, Jung H (2004) Phylogenetic analysis of / Ganoderma based on nearly complete mitochondrial small-subunit ribosomal DNA sequences. / Mycologia 96, 742鈥?55. doi: 10.2307/3762108 CrossRef
23. Hseu R, Wang H, Wang H, Moncalvo JM (1996) Differentiation and grouping of isolates of the / Ganoderma lucidum complex by random amplified polymorphic DNA-PCR compared with grouping on the basis of internal transcribed spacer sequences. / Applied and Environmental Microbiology 62, 1354鈥?363.
24. International Rubber Research and Development Board (1999) Red root rot. Available at http://www.irrdb.com/IRRDB/NaturalRubber/Diseases/ RedRootDisease.htm [Verified 26 February 2009].
25. Irianto RSB, Barry KM, Hidayati N, Ito S, Fiani A, Rimbawanto A, Mohammed CL (2006) Incidence, spatial analysis and genetic trials of root rot of / Acacia mangium in Indonesia. / Journal of Tropical Forest Science 18, 157鈥?65.
26. Ito S-I (1999) Study on mass mortalities of / Acacia mangium in the multistoried forest management project (1991-1999). Report to the Forestry Department Peninsular Malaysia, Perak State Forestry Department, and Japan International Cooperation Agency. 28 pp.
27. Ito S-I, Nanis LH (1997) Survey of heart rot on / Acacia mangium in Sabah, Malaysia. / Japan International Research Center for Agricultural Sciences 31, 65鈥?1.
28. Lee SS (1985) Tree disease and wood deterioration problems in Peninsular Malaysia. Occasional Paper No. 5. Faculty of Forestry, Agriculture, University of Malaysia, Kuala Lumpur. 15 pp.
29. Lee SS (1993 / a) Diseases. In 鈥?em class="a-plus-plus">Acacia mangium growing and utilization. MPTS Monograph series No. 3鈥? (Eds K Awang, D Taylor) pp. 203鈥?23. (Winrock International Institute for Agricultural Development: Arlington, VA)
30. Lee SS (1993 / b) Diseases of Acacias: an overview. In 鈥楢cacias for rural, industrial and environmental development. Proceedings of the second meeting of the consultative group for research and development of Acacias (COGREDA), Udorn Thani, Thailand, 15-18 February 1993鈥? (Eds K Awang, DA Taylor) pp. 225鈥?39. (Winrock International, FAO: Bangkok)
31. Lee SS (2000) The current status of root diseases of / Acacia mangium Willd. In 鈥?em class="a-plus-plus">Ganoderma diseases of perennial crops鈥? (Eds J Flood, PD Bridge, M Holderness) pp. 71鈥?9. (CABI Publishing: Wallingford, UK) CrossRef
32. Lee SS (2002) Overview of the heartrot problem in / Acacia 鈥?gap analysis and research opportunities. In 鈥楬eartrots in plantation hardwoods in Indonesia and Australia. ACIARTechnical Report 51E鈥? (Ed. KM Barry) pp. 26鈥?4. (Australian Centre for International Agricultural Research: Canberra)
33. Lim TM (1977) Production, germination and dispersal of basidiospores of / Ganoderma pseudoferreum on / Hevea. / Journal of the Rubber Research Institute of Malaysia 25, 93鈥?9.
34. Mehrotra MD, Pandey PC, Chakrabarti K, Suresh S, Hazra K (1996) Root and heart rots in / Acacia mangium plantations in India. / Indian Forester 122, 155鈥?60.
35. Moncalvo JM (2000) Systematics of / Ganoderma. In 鈥?em class="a-plus-plus">Ganoderma diseases of perennial crops鈥? (Eds J Flood, PD Bridge, M Holderness) pp. 23鈥?7. (CAB International: Wallingford, UK) CrossRef
36. Moncalvo JM, Ryvarden L (1997) A nomenclatural study of the Ganodermataceae Donk. / Synopsis Fungorum 11, 1鈥?14.
37. Moncalvo JM, Buchanan PK (2008) Molecular evidence for long distance dispersal across the Southern Hemisphere in the / Ganoderma applanatumaustrale species complex (Basidiomycota). / Mycological Research 112, 425鈥?36. doi: 10.1016/j.mycres.2007.12.001 CrossRef
38. Moncalvo JM, Wang H, Hseu R (1995) Gene phylogeny of the / Ganoderma lucidum complex based on ribosomal DNA sequences. Comparison with traditional taxonomic characters. / Mycological Research 99, 1489鈥?499. doi: 10.1016/S0953-7562(09)80798-3 CrossRef
39. Old KM, Lee SS, Sharma P, Yuan ZQ (2000) 鈥楢manual of diseases of tropical Acacias in Australia, South-East Asia and India.鈥?(Centre for International Forestry Research: Jakarta) 104 pp.
40. Quanten E (1997) The polypores (Polyporaceae s.l.) of Papua New Guinea. A preliminary conspectus. / Opera Botanica Belgica 11, 1鈥?52.
41. Risna RA Suhirman (2003) The diversity study of polyporous fungi in plantation and natural forest in South Sumatra. In 鈥楤otanical international conference, 15鈥?8 July 2003鈥? Bali Botanic Garden.
42. Ryvarden L (1985) Type studies in the Polyporaceae 17. Species described by W. A. Murrill. / Mycotaxon 23, 169鈥?98.
43. Ryvarden L (1994) Can we trust morphology in / Ganoderma? In鈥楶roceedings of contributed symposia 59A, / Ganoderma 鈥?systematics, phytopathology and pharmacology. Fifth international mycological congress, Vancouver, 14鈥?1 August 1994鈥? (Eds PK Buchanan, RS Hseu, JM Moncalvo) pp. 19鈥?4.
44. Ryvarden L, Johansen I (1980) 鈥楢 preliminary polypore flora of East Africa.鈥?(Fungiflora: Oslo) 636 pp.
45. Seo GS, Kirk PM (2000) Ganodermataceae: nomenclature and classification. In 鈥楪anoderma diseases of perennial crops鈥? (Eds J Flood, PD Bridge, M Holderness) pp. 3鈥?2. (CABI International: Wallingford, UK) CrossRef
46. Smith BJ, Sivasithamparam K (2000) Internal transcribed spacer ribosomal DNAsequence of five species of / Ganoderma from Australia. / Mycological Research 104, 943鈥?51. doi: 10.1017/S0953756200002458 CrossRef
47. Smith BJ, Sivasithamparam K (2003) Morphological studies of / Ganoderma (Ganodermataceae) from the Australasian and Pacific regions. / Australian Systematic Botany 16, 487鈥?03. doi: 10.1071/SB02001 CrossRef
48. Steyaert RL (1972) Species of / Ganoderma and related genera mainly of the Bogor and Leiden herbaria. / Persoonia 7, 55鈥?18.
49. Tham LX (1998) Aphylogenetic hypothesis of the Ganodermataceae based on a possible mode of basidiospore evolution. / Mycotaxon 69, 1鈥?2.
50. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. / Nucleic Acids Research 22, 4673鈥?680. doi: 10.1093/nar/22.22.4673 CrossRef
51. Utomo C, Niepold F (2000) Development of diagnostic methods for detecting / Ganoderma-infected oil palms. / Journal of Phytopathology 148, 507鈥?14. doi: 10.1046/j.1439-0434.2000.00478.x CrossRef
52. Wang D-M, Yao Y-J (2005) Intrastrain internal transcribed spacer heterogeneity in / Ganoderma species. / Canadian Journal of Microbiology 51, 113鈥?21. doi: 10.1139/w04-118 CrossRef
53. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In 鈥楶CR protocols: a guide to methods and applications鈥? (Eds MA Innis, DH Gelfand, JJ Sninsky, TJ White) pp. 315鈥?22. (Academic Press: San Diego, CA)
54. Ying SL, Chien CY, Davidson RW (1976) Root rot of / Acacia confusa. / Quarterly Journal of Chinese Forestry 9, 17鈥?1. - 作者单位：Morag Glen (1)
Neale L. Bougher (2)
Anthony A. Francis (3)
Susan Q. Nigg (1)
Su See Lee (4)
Ragil Irianto (5)
Karen M. Barry (3)
Christopher L. Beadle (1)
Caroline L. Mohammed (1) (3)
1. CSIRO Sustainable Ecosystems, Private Bag 12, 7001, Australia, Hobart, Tas
2. Department of Environment and Conservation, Locked Bag 104, 6983, Bentley Delivery Centre, WA, Australia
3. Tasmanian Institute of Agricultural Research, University of Tasmania, Private Bag 54, 7001, Hobart, Tas, Australia
4. Forest Research Institute Malaysia, Kepong, 52109, Kuala Lumpur, Malaysia
5. Forest and Nature Conservation Research and Development Center, Jalang, Gunung Batu No. 5, 16610, Bogor, Indonesia
文摘
Fungal sporocarps and cultures associated with signs and symptoms of root-rot disease were collected from Acacia mangium and other tropical hardwood species. The collections were identified by either morphological characters and/or by phylogenetic analysis based on DNA sequences as Ganoderma philippii, G. mastoporum, G. aff. steyaertanum, G. australe and Amauroderma rugosum. Phylogenetic analysis unequivocally placed in the G. philippii clade four sequences amplified from A. mangium root and butt tissue showing clear signs of red root-rot disease (roots are covered by a red rhizomorphic skin). Whereas G. philippii was the most frequently encountered fungal species in A. mangium with red root-rot disease, this study indicates that other fungal species related to G. mastoporum may cause root-rot disease with very similar symptoms. An isolate (FRIM 138) that had caused red root-rot disease in artificial inoculations carried out before this study and was presumed to be G. philippii, is here determined to be closely related to G. mastoporum, G. cupreum and G. sinense. A Ganoderma species associated with a yellow-brown root-rot disease killing trees in an A. mangium plantation in Central Java, previously identified as G. lucidum, is shown by phylogenetic analysis to be closely related to G. steyaertanum, though some morphological characters vary from the original description of that species.