Ochrobactrum endophyticum sp. nov., isolated from roots of Glycyrrhiza uralensis
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- 作者：Li Li ; Yan-Qiong Li ; Zhao Jiang ; Rui Gao ; Salam Nimaichand…
- 关键词：Ochrobactrum endophyticum sp. nov. ; Endophytic bacteria ; Glycyrrhiza uralensis F.
- 刊名：Archives of Microbiology
- 出版年：2016
- 出版时间：March 2016
- 年：2016
- 卷：198
- 期：2
- 页码：171-179
- 全文大小：513 KB
- 参考文献：Cappuccino JG, Sherman N (2002) Microbiology: a laboratory manual, 6th edn. Benjamin/Cummings, Menlo Park
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Yan-Qiong Li (2)
Zhao Jiang (3)
Rui Gao (4)
Salam Nimaichand (5)
Yan-Qing Duan (4)
Dilfuza Egamberdieva (6)
Wei Chen (4)
Wen-Jun Li (1) (3) (5)
1. Key Laboratory of Biogeography and Bioresource in Arid Land, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Ürümqi, 830011, People’s Republic of China
2. Kunming Medical University Haiyuan College, Kunming, 650106, People’s Republic of China
3. Yunnan Institute of Microbiology, Yunnan University, Kunming, 650091, People’s Republic of China
4. China Tobacco Yunnan Industrial Co. Ltd., Kunming, 650231, People’s Republic of China
5. State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, College of Ecology and Evolution, Sun Yat-Sen University, Guangzhou, 510275, People’s Republic of China
6. Department of Biotechnology and Microbiology, Faculty of Biology and Soil Science, National University of Uzbekistan, Tashkent, Republic of Uzbekistan, 100174 - 刊物类别：Biomedical and Life Sciences
- 刊物主题：Life Sciences
Microbiology
Microbial Ecology
Biochemistry
Cell Biology
Biotechnology
Ecology - 出版者：Springer Berlin / Heidelberg
- ISSN：1432-072X
文摘
A novel Gram-staining negative, motile, rod-shaped and aerobic bacterial strain, designated EGI 60010T, was isolated from healthy roots of Glycyrrhiza uralensis F. collected from Yili County, Xinjiang Province, North-West China. The 16S rRNA gene sequence of strain EGI 60010T showed 97.2 % sequence similarities with Ochrobactrum anthropi ATCC 49188T and Ochrobactrum cytisi ESC1T, and 97.1 % with Ochrobactrum lupini LUP21T. The phylogenetic analysis based on 16S rRNA gene sequences showed that the new isolate clustered with members of the genera Ochrobactrum, and formed a distinct clade in the neighbour-joining tree. Q-10 was identified as the respiratory quinone for strain EGI 60010T. The major fatty acids were summed feature 8 (C18:1 ω6c and/or C18:1 ω7c), C19:0 cyclo ω8c, summed feature 4 (C17:1 iso I/anteiso B) and C16:0. The polar lipids detected were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol and phosphatidylcholine. The DNA G+C content of strain EGI 60010T was determined to be 60.4 mol%. The genomic DNA relatedness values determined between strain EGI 60010T and the closely related strains O. anthropi JCM 21032T, O. cytisi CCTCC AB2014258T and O. lupini NBRC 102587T were 50.3, 50.0 and 41.6 %, respectively. Based on the results of the molecular studies supported by its differentiating phenotypic characteristics, strain EGI 60010T was considered to represent a novel species within the genus Ochrobactrum, for which the name Ochrobactrum endophyticum sp. nov., is proposed. The type strain is EGI 60010T (=CGMCC 1.15082T = KCTC 42485T = DSM 29930T). Keywords Ochrobactrum endophyticum sp. nov. Endophytic bacteria Glycyrrhiza uralensis F.