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Fine mapping Fhb4, a major QTL conditioning resistance to Fusarium infection in bread wheat (Triticum aestivum L.)
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  • 作者:Shulin Xue (1)
    Guoqiang Li (1)
    Haiyan Jia (1)
    Feng Xu (1)
    Feng Lin (1)
    Mingzhi Tang (1)
    Yao Wang (1)
    Xia An (1)
    Haibin Xu (1)
    Lixia Zhang (1)
    Zhongxin Kong (1)
    Zhengqiang Ma (1) (2)
  • 刊名:Theoretical and Applied Genetics
  • 出版年:2010
  • 出版时间:June 2010
  • 年:2010
  • 卷:121
  • 期:1
  • 页码:147-156
  • 全文大小:472KB
  • 参考文献:1. Akhunov ED, Goodyear AW, Geng S, Qi LL, Echalier B, Gill BS, Miftahudin, Gustafson JP, Lazo G, Chao S, Anderson OD, Linkiewicz AM, Dubcovsky J, La Rota M, Sorrells ME, Zhang D, Nguyen HT, Kalavacharla V, Hossain K, Kianian SF, Peng J, Lapitan NLV, Gonzalez-Hernandez JL, Anderson JA, Choi DW, Close TJ, Dilbirligi M, Gill KS, Walker-Simmons MK, Steber C, McGuire PE, Qualset CO, Dvorak J (2003) The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms. Genome Res 13:753-63 CrossRef
    2. Andaya VC, Tai TH (2007) Fine mapping of the / qCTS4 locus associated with seedling cold tolerance in rice ( / Oryza sativa L.). Mol Breed 20:349-58 CrossRef
    3. Bassam BJ, Gaetano-Anollé G, Gresshoff PM (1991) Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal Biochem 196:80-3 CrossRef
    4. Bossolini E, Wicker T, Knobel PA, Keller B (2007) Comparison of orthologous loci from small grass genomes / Brachypodium and rice: implications for wheat genomics and grass genome annotation. Plant J 49:704-17 CrossRef
    5. Buerstmayr H, Steiner B, Hartl L, Griesser M, Angerer N, Lengauer D, Miedaner T, Schneider B, Lemmens M (2003) Molecular mapping of QTL for Fusarium head blight resistance in spring wheat. II. Resistance to fungal penetration and spread. Theor Appl Genet 107:503-08 CrossRef
    6. Buerstmayr H, Ban T, Anderson JA (2009) QTL mapping and marker-assisted selection for Fusarium head blight resistance in wheat: a review. Plant Breed 128:1-6 CrossRef
    7. Chen J, Griffey CA, Maroof MAS, Stromberg EL, Biyashev RM, Zhao W, Chappell MR, Pridgen TH, Dong Y, Zeng Z (2006) Validation of two major quantitative trait loci for fusarium head blight resistance in Chinese wheat line W14. Plant Breed 125:99-01 CrossRef
    8. Cuthbert PA, Somers DJ, Brule-Babel A (2007) Mapping of / Fhb2 on chromosome 6BS: a gene controlling Fusarium head blight field resistance in bread wheat ( / Triticum aestivum L.). Theor Appl Genet 114:429-37 CrossRef
    9. El-Din El-Assal S, Alonso-Blanco C, Peeters AJ, Raz V, Koornneef M (2001) A QTL for flowering time in / Arabidopsis reveals a novel allele of / CRY2. Nat Genet 29:435-40 CrossRef
    10. Endo TR, Gill BS (1996) The deletion stocks of common wheat. J Hered 87:295-07
    11. Faris JD, Fellers JP, Brooks SA, Gill BS (2003) A bacterial artificial chromosome contig spanning the major domestication locus / Q in wheat and identification of a candidate gene. Genetics 164:311-21
    12. Gilbert J, Tekauz A (2000) Review: recent developments in research on fusarium head blight of wheat in Canada. Can J Plant Pathol 22:1-
    13. Gill BS, Friebe B, Endo TR (1991) Standard karyotype and nomenclature system for description of chromosome bands and structural aberrations in wheat ( / Triticum aestivum). Genome 34:830-39
    14. Guyomarc’h H, Sourdille P, Charmet G, Edwards KJ, Bernard M (2002) Characterization of polymorphic microsatellite markers from / Aegilops tauschii and transferability to the D-genome of bread wheat. Theor Appl Genet 104:1164-172 CrossRef
    15. Huang XQ, Cloutier S, Lycar L, Radovanovic N, Humphreys DG, Noll JS, Somers DJ, Brown PD (2006) Molecular detection of QTLs for agronomic and quality traits in a doubled haploid population derived from two Canadian wheats ( / Triticum aestivum L.). Theor Appl Genet 113:753-66 CrossRef
    16. Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172-75
    17. Krattinger SG, Lagudah ES, Spielmeyer W, Singh RP, Huerta-Espino J, McFadden H, Bossolini E, Selter LL, Keller B (2009) A putative ABC transporter confers durable resistance to multiple fungal pathogens in wheat. Science 323:1360-363 CrossRef
    18. La Rota M, Sorrells ME (2004) Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat. Funct Integr Genomics 4:34-6 CrossRef
    19. Lin F, Kong ZX, Zhu HL, Xue SL, Wu JZ, Tian DG, Wei JB, Zhang CQ, Ma ZQ (2004) Mapping QTL associated with resistance to Fusarium head blight in the Nanda 2419?×?Wangshuibai population. I. Type II resistance. Theor Appl Genet 109:1504-511 CrossRef
    20. Lin F, Xue SL, Zhang ZZ, Zhang CQ, Kong ZX, Yao GQ, Tian DG, Zhu HL, Li CJ, Cao Y, Wei JB, Luo QY, Ma ZQ (2006) Mapping QTL associated with resistance to Fusarium head blight in the Nanda 2419?×?Wangshuibai population. II. Type I resistance. Theor Appl Genet 112:528-35 CrossRef
    21. Lincoln SE, Daly MJ, Lander ES (1992) Constructing genetic maps with MAPMAKER/EXP Version 3.0. Technical Report, 3rd edn. Whitehead Institute, Cambridge, MA
    22. Liu SX, Anderson JA (2003) Targeted molecular mapping of a major wheat QTL for Fusarium head blight resistance using wheat ESTs and synteny with rice. Genome 46:817-23 CrossRef
    23. Liu RH, Meng JL (2003) MapDraw: a Microsoft Excel macro for drawing genetic linkage maps based on given genetic linkage data. Heraditas 25:317-21
    24. Liu S, Zhang X, Pumphrey MO, Stack RW, Gill BS, Anderson JA (2006) Complex microcolinearity among wheat, rice, and barley revealed by fine mapping of the genomic region harboring a major QTL for resistance to Fusarium head blight in wheat. Funct Integr Genomics 6:83-9 CrossRef
    25. Liu S, Abate ZA, Lu H, Musket T, Davis GL, McKendry AL (2007) QTL associated with Fusarium head blight resistance in the soft red winter wheat Ernie. Theor Appl Genet 115:417-27 CrossRef
    26. L?ffler M, Sch?n CC, Miedaner T (2009) Revealing the genetic architecture of FHB resistance in hexaploid wheat ( / Triticum aestivum L.) by QTL meta-analysis. Mol Breed 23:473-88 CrossRef
    27. Ma ZQ, Sorrells ME (1995) Genetic analysis of fertility restoration in wheat using restriction fragment length polymorphisms. Crop Sci 35:1137-143 CrossRef
    28. Ma ZQ, R?der MS, Sorrells ME (1996) Frequencies and sequence characteristics of / di-, / tri-, and / tetra-nucleotide microsatellites in wheat. Genome 39:123-30 CrossRef
    29. McCartney CA, Somers DJ, Humphreys DG, Lukow O, Ames N, Noll J, Cloutier S, McCallum BD (2005) Mapping quantitative trait loci controlling agronomic traits in the spring wheat cross RL4452?×?‘AC Domain- Genome 48:870-83
    30. Miftahudin, Ross K, Ma XF, Mahmoud AA, Layton J, Milla MAR, Chikmawati T, Ramalingam J, Feril O, Pathan MS, Momirovic GS, Kim S, Chema K, Fang P, Haule L, Struxness H, Birkes J, Yaghoubian C, Skinner R, McAllister J, Nguyen V, Qi LL, Echalier B, Gill BS, Linkiewicz AM, Dubcovsky J, Akhunov ED, Dvorák J, Dilbirligi M, Gill KS, Peng JH, Lapitan NLV, Bermudez-Kandianis CE, Sorrells ME, Hossain KG, Kalavacharla V, Kianian SF, Lazo GR, Chao S, Anderson OD, Gonzalez-Hernandez J, Conley EJ, Anderson JA, Choi DW, Fenton RD, Close TJ, McGuire PE, Qualset CO, Nguyen HT, Gustafson JP (2004) Analysis of expressed sequence tag loci on wheat chromosome group 4. Genetics 168:651-63 CrossRef
    31. Qi LL, Echalier B, Chao S, Lazo GR, Butler GE, Anderson OD, Akhunov ED, Dvorak J, Linkiewicz AM, Ratnasiri A, Dubcovsky J, Bermudez-Kandianis CE, Greene RA, Kantety R, La Rota CM, Munkvold JD, Sorrells SF, Sorrells ME, Dilbirligi M, Sidhu D, Erayman M, Randhawa HS, Sandhu D, Bondareva SN, Gill KS, Mahmoud AA, Ma XF, Miftahudin, Gustafson JP, Conley EJ, Nduati V, Gonzalez-Hernandez JL, Anderson JA, Peng JH, Lapitan NLV, Hossain KG, Kalavacharla V, Kianian SF, Pathan MS, Zhang DS, Nguyen HT, Choi DW, Fenton RD, Close TJ, McGuire PE, Qualset CO, Gill BS (2004) A chromosome bin map of 16, 000 EST loci and distribution of genes among the three genomes of polyploid wheat. Genetics 168:701-12 CrossRef
    32. Qi LL, Pumphrey MO, Friebe B, Chen PD, Gill BS (2008) Molecular cytogenetic characterization of alien introgressions with gene / Fhb3 for resistance to Fusarium head blight disease of wheat. Theor Appl Genet 117:1155-166 CrossRef
    33. Quarrie SA, Steed A, Calestani C, Semikhidskii A, Lebreton C, Chinoy C, Steele N, Pljevljakusic D, Waterman E, Weyen J, Schondelmaier J, Habash DZ, Farmer P, Saker L, Clarkson DT, Abugalieva A, Yessimbekova M, Turuspekov Y, Abugalieva S, Tuberosa R, Sanguineti MC, Hollington PA, Aragues R, Royo A, Dodig D (2005) A high-density genetic map of hexapoid wheat ( / Triticum aestivum L.) from the cross Chinese Spring?×?SQ1 and its use to compare QTLs for grain yield across a range of environments. Theor Appl Genet 110:865-80 CrossRef
    34. R?der MS, Korzun V, Wendehake K, Plaschke J, Tixer MH, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149:2007-023
    35. Schroeder HW, Christensen JJ (1963) Factors affecting resistance of wheat to scab caused by / Gibberella zeae. Phytopathology 53:831-38
    36. Somers DJ, Fedak G, Savard M (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat. Genome 46:555-64 CrossRef
    37. Somers DJ, Isaac P, Edwards K (2004) A high-density microsatellite consensus map for bread wheat ( / Triticum aestivum L.). Theor Appl Genet 109:1105-114 CrossRef
    38. Song QJ, Shi JR, Singh S, Fickus EW, Costa JM, Lewis J, Gill BS, Ward R, Cregan PB (2005) Development and mapping of microsatellite (SSR) markers in wheat. Theor Appl Genet 110:550-60 CrossRef
    39. Song XJ, Huang W, Shi M, Zhu MZ, Lin HX (2007) A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase. Nat Genet 39:623-30 CrossRef
    40. Sourdille P, Singh S, Cadalen T, Brown-Guedira GL, Gay G, Qi LL, Gill BS, Dufour P, Murigneux A, Bernard M (2004) Microsatellite-based deletion bin system for the establishment of genetic-physical map relationships in wheat ( / Triticum aestivum L.). Funct Integr Genomics 4:12-5 CrossRef
    41. Stein N, Feuillet C, Wicker T, Schlagenhauf E, Keller B (2000) Subgenome chromosome walking in wheat: a 450-kb physical contig in / Triticum monococcum L. spans the / Lr10 resistance locus in hexaploid wheat ( / Triticum aestivum L.). Proc Natl Acad Sci USA 97:13436-3441 CrossRef
    42. Torada A, Koike M, Mochida K, Ogihara Y (2006) SSR-based linkage map with new markers using an intraspecific population of common wheat. Theor Appl Genet 112:1042-051 CrossRef
    43. Uauy C, Distelfeld A, Fahima T, Blechl A, Dubcovsky J (2006) A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science 314:1298-301 CrossRef
    44. Xue SL, Zhang ZZ, Lin F, Kong ZX, Cao Y, Li CJ, Yi HY, Mei MF, Zhao DM, Zhu HL, Xu HB, Wu JZ, Tian DG, Zhang CQ, Ma ZQ (2008) A high-density intervarietal map of the wheat genome enriched with markers derived from expressed sequence tags. Theor Appl Genet 117:181-89 CrossRef
    45. Xue SL, Li GQ, Jia HY, Lin F, Cao Y, Xu F, Tang MZ, Wang Y, Wu XY, Zhang ZZ, Zhang LX, Kong ZX, Ma ZQ (2009) Marker-assisted development and evaluation of near-isogenic lines for scab resistance QTLs of wheat. Mol Breed. doi:10.1007/s11032-009-9339-y
    46. Yahiaoui N, Srichumpa P, Dudler R, Keller B (2004) Genome analysis at different ploidy levels allows cloning of the powdery mildew resistance gene / Pm3b from hexaploid wheat. Plant J 37:528-38 CrossRef
    47. Yan L, Loukoianov A, Blechl A, Tranquilli G, Ramakrishna W, SanMiguel P, Bennetzen JL, Echenique V, Dubcovsky J (2004) The wheat / VRN2 gene is a flowering repressor down-regulated by vernalization. Science 303:1640-644 CrossRef
    48. Yang J, Bai GH, Shaner GE (2005a) Novel quantitative trait loci (QTL) for Fusarium head blight resistance in wheat cultivar Chokwang. Theor Appl Genet 111:1571-579 CrossRef
    49. Yang ZP, Gilbert J, Fedak G, Somers DJ (2005b) Genetic characterization of QTL associated with resistance to Fusarium head blight in a doubled-haploid spring wheat population. Genome 48:187-96
    50. Yu GT, Cai XW, Harris MO, Gu YQ, Luo MC, Xu SS (2009) Saturation and comparative mapping of the genomic region harboring Hessian fly resistance gene / H26 in wheat. Theor Appl Genet 118:1589-599 CrossRef
  • 作者单位:Shulin Xue (1)
    Guoqiang Li (1)
    Haiyan Jia (1)
    Feng Xu (1)
    Feng Lin (1)
    Mingzhi Tang (1)
    Yao Wang (1)
    Xia An (1)
    Haibin Xu (1)
    Lixia Zhang (1)
    Zhongxin Kong (1)
    Zhengqiang Ma (1) (2)

    1. The Applied Plant Genomics Laboratory of Crop Genomics and Bioinformatics Centre, and National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
    2. College of Agricultural Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
  • ISSN:1432-2242
文摘
Qfhi.nau-4B is a major quantitative trait locus (QTL) against Fusarium graminearum infection identified in the Fusarium head blight-resistant germplasm Wangshuibai. To fine map this QTL, a recombinant inbred line (RIL) population of 530 lines derived from Nanda2419?×?Wangshuibai and the BC3F2 population derived from the cross of a Qfhi.nau-4B near isogenic line (NIL) with susceptible cultivar Mianyang 99-323 as the recurrent parent were screened for recombinants occurred between microsatellite markers Xbarc20 and Xwmc349 that flank Qfhi.nau-4B. A total of 95 recombinants were obtained, including 45 RIL recombinants obtained through reverse-selection of Qfhi.nau-5A and 50 NIL recombinants from the BC3F2 population. Genotyping these recombinant lines with 22 markers mapping to the Xbarc20 and Xwmc349 interval revealed fourteen genotypes of the RIL recombinants as well as of the NIL recombinants. Two-year field evaluation of their resistance to Fusarium infection showed that these lines could be clearly classified into two groups according to percentage of infected spikes. The more resistant class had over 60% less infection than the susceptible class and were common to have Wangshuibai chromatin in the 1.7-cM interval flanked by Xhbg226 and Xgwm149. None of the susceptible recombinants had this Wangshuibai chromatin. Qfhi.nau-4B was thus confined between Xhbg226 and Xgwm149 and named Fhb4. The interval harboring Fhb4 was mapped to 4BL5-0.86-.00 bin using Chinese Spring deletion lines, a region with about 5.7 times higher recombination rate than the genome average. This study established the basis for map-based cloning of Fhb4.

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