LocExpress: a web server for efficiently estimating expression of novel transcripts

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• 作者：Mei Hou ; Feng Tian ; Shuai Jiang ; Lei Kong ; Dechang Yang ; Ge Gao
• 关键词：Expression estimation ; Transcriptome ; RNA ; Seq ; Web server
• 刊名：BMC Genomics
• 出版年：2016
• 出版时间：December 2016
• 年：2016
• 卷：17
• 期：13-supp
• 全文大小：1073KB
• 刊物主题：Life Sciences, general; Microarrays; Proteomics; Animal Genetics and Genomics; Microbial Genetics and Genomics; Plant Genetics & Genomics;
• 出版者：BioMed Central
• ISSN：1471-2164
• 卷排序：17

文摘

BackgroundThe temporal and spatial-specific expression pattern of a transcript in multiple tissues and cell types can indicate key clues about its function. While several gene atlas available online as pre-computed databases for known gene models, it’s still challenging to get expression profile for previously uncharacterized (i.e. novel) transcripts efficiently.