用户名: 密码: 验证码:
Nitrate reduction coupled with microbial oxidation of sulfide in river sediment
详细信息    查看全文
  • 作者:Xunan Yang (1)
    Shan Huang (1)
    Qunhe Wu (1) eeswuqh@mail.sysu.edu.cn
    Renduo Zhang (1) zhangrd@mail.sysu.edu.cn
  • 关键词:Flow ; through reactor – ; Nitrate reduction – ; Sediment – ; Sulfide oxidation
  • 刊名:Journal of Soils and Sediments
  • 出版年:2012
  • 出版时间:October 2012
  • 年:2012
  • 卷:12
  • 期:9
  • 页码:1435-1444
  • 全文大小:309.0 KB
  • 参考文献:1. Aelion CM, Warttinger U (2009) Low sulfide concentrations affect nitrate transformations in freshwater and saline coastal retention pond sediments. Soil Biol Biochem 41:735–741
    2. An S, Gardner WS (2002) Dissimilatory nitrate reduction to ammonium (DNRA) as a nitrogen link versus denitrification as a sink in a shallow estuary (Laguna Madre/Baffin Bay, Texas). Mar Ecol Prog Ser 237:41–50
    3. Beristain-Cardoso R, Texier A, Sierra-脕lvarez R, Razo-Flores E, Field JA, Gomez J (2009) Effect of initial sulfide concentration on sulfide and phenol oxidation under denitrifying conditions. Chemosphere 74:200–205
    4. Boyer EW, Howarth RW, Galloway JN, Dentener FJ, Green PA, V枚r枚smarty CJ (2006) Riverine nitrogen export from the continents to the coasts. Global Biogeochem Cycle 20:GB1S91
    5. Braker G, Fesefeldt A, Witzel K (1998) Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples. Appl Environ Microb 64:3769–3775
    6. Brettar I, Rheinheimer G (1991) Denitrification in the central Baltic: evidence for H2S-oxidation as motor of denitrification at the oxic–anoxic interface. Mar Ecol Prog Ser 77:157–169
    7. Brunet RC, Garcia-Gil LJ (1996) Sulfide-induced dissimilatory nitrate reduction to ammonia in anaerobic freshwater sediments. FEMS Microbiol Ecol 21:131–138
    8. Burgin AJ, Hamilton SK (2007) Have we overemphasized the role of denitrification in aquatic ecosystems? A review of nitrate removal pathways. Front Ecol Environ 5:89–96
    9. Burgin AJ, Hamilton SK (2008) NO3-driven SO42− production in freshwater ecosystems: Implications for N and S cycling. Ecosystems 11:908–922
    10. Chen F, Yang Y, Zhang D, Zhang L (2006) Heavy metals associated with reduced sulfur in sediments from different deposition environments in the Pearl River estuary, China. Environ Geochem Health 28:265–272
    11. Dai M, Wang L, Guo X, Zhai W, Li Q, He B, Kao S-J (2006) Nitrification and inorganic nitrogen distribution in a large perturbed river/estuarine system: the Pearl River Estuary, China. Biogeosciences 5:1227–1244
    12. Dodds KL, Collins-Thompson DL (1985) Production of N2O and CO2 during the reduction of NO2− by Lactobacillus lactis TS4. Appl Environ Microb 50:1550–1552
    13. Fan LF, Shieh WY, Wu WF, Chen CP (2006) Distribution of nitrogenous nutrients and denitrifiers strains in estuarine sediment profiles of the Tanshui River, northern Taiwan. Estuar Coast Shelf Sci 69:543–553
    14. Far铆as L, Graco M, Ulloa O (2004) Temporal variability of nitrogen cycling in continental-shelf sediments of the upwelling ecosystem off central Chile. Deep-Sea Res Pt Ii 51:2491–2505
    15. Forshay KJ, Stanley EH (2005) Rapid nitrate loss and denitrification in a temperate river floodplain. Biogeochemistry 75:43–64
    16. Fossing H, Gallardo VA, J酶rgensen BB et al (1995) Concentration and transport of nitrate by the mat-forming sulfur bacterium Thioploca. Nature 374:713–715
    17. Galloway JN, Dentener FJ, Capone DG et al (2004) Nitrogen cycles: past, present, and future. Biogeochemistry 70:153–226
    18. Haaijer SCM, Lamers LPM, Smolders AJP, Jetten MSM, Op den Camp HJM (2007) Iron sulfide and pyrite as potential electron donors for microbial nitrate reduction in freshwater wetlands. Geomicrobiol J 24:391–401
    19. Hordijk CA, Snieder M, Van Engelen JJM, Cappenberg TE (1987) Estimation of bacterial nitrate reduction rates at in situ concentrations in freshwater sediments. Appl Environ Microbiol 53:217–223
    20. Huang S, Chen C, Yang X, Wu Q, Zhang R (2011) Distribution of typical denitrifying functional genes and diversity of the nirS-encoding bacterial community related to environmental characteristics of river sediments. Biogeosciences 8:5251–5280
    21. Jiang LJ, Zheng YP, Peng XT (2009) Vertical distribution and diversity of sulfate-reducing prokaryotes in the Pearl River estuarine sediments, Southern China. FEMS Microbiol Ecol 70:249–262
    22. J酶rgensen BB, Gallardo VA (1999) Thioploca spp.: filamentous sulfur bacteria with nitrate vacuoles. FEMS Microbiol Ecol 28:301–313
    23. Kamp A, Stief P, Schulz-Vogt HN (2006) Anaerobic sulfide oxidation with nitrate by a freshwater Beggiatoa enrichment culture. Appl Environ Microb 72:4755–4760
    24. Kojima H, Fukui M (2003) Phylogenetic analysis of Beggiatoa spp. from organic rich sediment of Tokyo Bay, Japan. Water Res 37:3216–3223
    25. Korom SF (1992) Natural denitrification in the saturated zone: a review. Water Resour Res 28:1657–1668
    26. Laverman AM, Van Cappellen P, van Rotterdam-Los D, Pallud C, Abell J (2006) Potential rates and pathways of microbial nitrate reduction in coastal sediments. FEMS Microbiol Ecol 58:179–192
    27. Laverman AM, Canavan RW, Slomp CP, Van Cappellen P (2007) Potential nitrate removal in a coastal freshwater sediment (Haringvliet Lake, The Netherlands) and response to salinization. Water Res 41:3061–3068
    28. Laverman AM, Garnier JA, Mounier EM, Roose-Amsaleg CL (2010) Nitrous oxide production kinetics during nitrate reduction in river sediment. Water Res 44:1753–1764
    29. Li F, Yang R, Ti C, Lang M, Kimura SD, Yan X (2010) Denitrification characteristics of pond sediments in a Chinese agricultural watershed. Soil Sci Plant Nutr 56:66–71
    30. Lu FH, Ni HG, Liu F, Zeng EY (2009) Occurrence of nutrients in riverine runoff of the Pearl River Delta, South China. J Hydrol 376:107–115
    31. Ma HB, Aelion CM (2005) Ammonium production during microbial nitrate removal in soil microcosms from a developing marsh estuary. Soil Biol Biochem 37:1869–1878
    32. Magalh茫es CM, Joye SB, Moreira RM, Wiebe WJ, Bordalo AA (2005) Effect of salinity and inorganic nitrogen concentration on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal. Water Res 39:1783–1794
    33. Maz茅as L, Vigneron V, Le-Menach K, Budzinski H, Audic JM, Bernet N, Bouchez T (2008) Elucidation of nitrate reduction pathways in anaerobic bioreactors using a stable isotope approach. Rapid Commun Mass Spectrom 22:1746–1750
    34. Megonigal JP, Hines ME, Visscher PT (2004) Anaerobic metabolism: linkages to trace gases and aerobic processes. In: Schlesinger WH (ed) Biogeochemistry. Elsevier-Pergamon, Oxford, pp 317–424
    35. Pallud C, Meile C, Laverman AM, Abell J, Van Cappellen P (2007) The use of flow-through sediment reactors in biogeochemical kinetics: methodology and examples of applications. Mar Chem 106:256–271
    36. Payne EK, Burgin AJ, Hamilton SK (2009) Sediment nitrate manipulation using porewater equilibrators reveals potential for N and S coupling in freshwaters. Aquat Microb Ecol 54:233–241
    37. Pi帽a-Ochoa E, 脕lvarez-Cobelas M (2006) Denitrification in aquatic environments: a cross-system analysis. Biogeochemistry 81:111–130
    38. Qiu D, Huang L, Zhang J, Lin S (2010) Phytoplankton dynamics in and near the highly eutrophic Pearl River Estuary, South China Sea. Cont Shelf Res 30:177–186
    39. Reyna L, Wunderlin DA, Genti-Raimondi S (2010) Identification and quantification of a novel nitrate-reducing community in sediments of Suqu铆a River basin along a nitrate gradient. Environ Pollut 158:1608–1614
    40. Sayama M, Risgaard-Petersen N, Nielsen LP, Fossing H, Christensen PB (2005) Impact of bacterial NO3− transport on sediment biogeochemistry. Appl Environ Microb 71:7575–7577
    41. Scala DJ, Kerkhof LJ (1998) Nitrous oxide reductase (nosZ) gene-specific PCR primers for detection of denitrifiers and three nosZ genes from marine sediments. FEMS Microbiol Lett 162:61–68
    42. Seitzinger S, Harrison JA, Bohlke JK, Bouwman AF, Lowrance R, Peterson B, Tobias C, Van Drecht G (2006) Denitrification across landscapes and waterscapes: a synthesis. Ecol Appl 16:2064–2090
    43. Senga Y, Mochida K, Fukumori R, Okamoto N, Seike Y (2006) N2O accumulation in estuarine and coastal sediments: the influence of H2S on dissimilatory nitrate reduction. Estuar Coast Shelf Sci 67:231–238
    44. Shao M, Zhang T, Fang HH (2010) Sulfur-driven autotrophic denitrification: diversity, biochemistry, and engineering applications. Appl Microbiol Biotechnol 88:1027–1042
    45. Sheng Y, Fu G, Chen F, Chen J (2011) Geochemical characteristics of inorganic sulfur in Shijing River, South China. J Environ Monit 13:807–812
    46. Silvennoinen H, Liikanen A, Torssonen J, Stange CF, Martikainen PJ (2008) Denitrification and N2O effluxes in the Bothnian Bay (northern Baltic Sea) river sediments as affected by temperature under different oxygen concentrations. Biogeochemistry 88:63–72
    47. Silver WL, Herman DJ, Firestone MK (2001) Dissimilatory nitrate reduction to ammonium in upland tropical forest soils. Ecology 82:2410–2416
    48. Smith CJ, Nedwell DB, Dong LF, Osborn AM (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Appl Environ Microb 73:3612–3622
    49. Strous M, Pelletier E, Mangenot S et al (2006) Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature 440:790–794
    50. Thamdrup B, Dalsgaard T (2002) Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments. Appl Environ Microb 68:1312–1318
    51. Thr盲back IN, Enwall K, Jarvis A, Hallin S (2004) Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE. FEMS Microbiol Ecol 49:401–417
    52. Tiedje JM (1988) Ecology of denitrification and dissimilatory nitrate reduction to ammonium. In: Zehnder AJB (ed) Environmental microbiology of anaerobes. Wiley, New York, pp 179–244
    53. Tiquia SM, Masson SA, Devol A (2006) Vertical distribution of nitrite reductase genes (nirS) in continental margin sediments of the Gulf of Mexico. FEMS Microbiol Ecol 58:464–475
    54. Trimmer M, Nicholls JC, Deflandre B (2003) Anaerobic ammonium oxidation measured in sediments along the Thames estuary, United Kingdom. Appl Environ Microb 69:6447–6454
    55. Weber KA, Urrutia MM, Churchill PF, Kukkadapu RK, Roden EE (2006) Anaerobic redox cycling of iron by freshwater sediment microorganisms. Environ Microbiol 8:100–113
    56. Woese CR, Mandelco L, Yang D, Gherna R, Madigan MT (1990) The case for relationship of the flavobacteria and their relatives to the green sulfur bacteria. Syst Appl Microbiol 13:258–262
    57. Zhang T, Zhang M, Shao MF, Fang HHP (2009) Autotrophic denitrification in nitrate-induced marine sediment remediation and Sulfurimonas denitrificans-like bacteria. Chemosphere 76:677–682
    58. Zopfi J, Kjaer T, Nielsen LP, J酶rgensen BB (2001) Ecology of Thioploca spp.: nitrate and sulfur storage in relation to chemical microgradients and influence of Thioploca spp. on the sedimentary nitrogen cycle. Appl Environ Microb 67:5530–5537
  • 作者单位:1. School of Environmental Science and Engineering, Sun Yat-sen University, Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Guangzhou, Guangdong 510275, People鈥檚 Republic of China
  • ISSN:1614-7480
文摘
Purpose Nitrate (NO3−) is often considered to be removed mainly through microbial respiratory denitrification coupled with carbon oxidation. Alternatively, NO3− may be reduced by chemolithoautotrophic bacteria using sulfide as an electron donor. The aim of this study was to quantify the NO3− reduction process with sulfide oxidation under different NO3− input concentrations in river sediment.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700