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Genetic differentiation and phylogeography of partially sympatric species complex Rhizophora mucronata Lam. and R. stylosa Griff. using SSR markers
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  • 作者：Alison K S Wee (1) (2)
    Koji Takayama (3)
    Jasher L Chua (4)
    Takeshi Asakawa (1)
    Sankararamasubramanian H Meenakshisundaram (5)
    Onrizal (6)
    Bayu Adjie (7)
    Erwin Riyanto Ardli (8)
    Sarawood Sungkaew (9)
    Norhaslinda Binti Malekal (10)
    Nguyen Xuan Tung (11)
    Severino G Salmo III (12)
    Orlex Baylen Yllano (13)
    M Nazre Saleh (14)
    Khin Khin Soe (15)
    Yoichi Tateishi (16)
    Yasuyuki Watano (1)
    Shigeyuki Baba (17) (18)
    Edward L Webb (4)
    Tadashi Kajita (1)

    1. Department of Biology     ; Graduate School of Science ; Chiba University ; 1-33 Yayoi-cho ; Inage-ku ; Chiba ; 263-8522 ; Japan
    2. Present Address     ; Center for Integrative Conservation ; Xishuangbanna Tropical Botanical Garden ; Chinese Academy of Sciences ; Menglun ; Mengla ; Yunnan ; 666303 ; China
    3. The University Museum     ; The University of Tokyo ; Hongo 7-3-1 ; Tokyo ; 113-0033 ; Japan
    4. Department of Biological Sciences     ; National University of Singapore ; Singapore ; 117543 ; Singapore
    5. Biotechnology Programme     ; M.S. Swaminathan Research Foundation ; Chennai ; India
    6. Forestry Sciences Department     ; Universitas Sumatera Utara ; Medan ; Indonesia
    7. Bali Botanical Garden     ; Indonesian Institute of Sciences ; Bali ; Indonesia
    8. Faculty of Biology     ; Jenderal Soedirman University ; Purwokerto ; Indonesia
    9. Forest Biology Department     ; Faculty of Forestry ; Kasetsart University ; Bangkok ; Thailand
    10. Institute for Tropical Biology and Conservation     ; Universiti Malaysia Kota Kinabalu ; Kota Kinabalu ; Malaysia
    11. Mangrove Ecosystem Research Centre     ; Hanoi National University of Education ; Hanoi ; Vietnam
    12. Department of Environmental Science     ; School of Science and Engineering ; Ateneo de Manila University ; Quezon City ; Philippines
    13. Biology Department     ; College of Science and Technology ; Adventist University of the Philippines ; Silang ; 4118 ; Cavite ; Philippines
    14. Department of Forest Production     ; Faculty of Forestry ; Universiti Putra Malaysia ; Serdang ; Malaysia
    15. Department of Botany     ; University of Yangon ; Yangon ; Myanmar
    16. Faculty of Education     ; University of the Ryukyus ; Senbaru ; Okinawa ; Japan
    17. Tropical Biosphere Research Center     ; University of the Ryukyus ; Iriomote ; Okinawa ; Japan
    18. International Society for Mangrove Ecosystems (ISME)     ; c/o Faculty of Agriculture ; University of the Ryukyus ; Senbaru ; Okinawa ; 903-0129 ; Japan
  • 关键词：Biogeography ; Coastal plants ; Gene flow ; Genetic diversity ; Genetic structure ; Indo ; West Pacific ; Mangrove ; Microsatellite ; Nuclear DNA ; Population genetics
  • 刊名：BMC Evolutionary Biology
  • 出版年：2015
  • 出版时间：December 2015
  • 年：2015
  • 卷：15
  • 期：1
  • 全文大小：2,461 KB
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    80. Wee AKS, Takayama K, Chua JL, Asakawa T, Meenakshisundaram SH, Onrizal, et. al, Webb EL Data from: Discerning two peas in a pod: Genetic differentiation and phylogeography of partially sympatric species complex Rhizophora mucronata Lam. and R. stylosa Griff. using SSR markers. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.42711
  • 刊物主题：Evolutionary Biology; Animal Systematics/Taxonomy/Biogeography; Entomology; Genetics and Population Dynamics; Life Sciences, general;
  • 出版者：BioMed Central
  • ISSN：1471-2148
文摘
Background Mangrove forests are ecologically important but globally threatened intertidal plant communities. Effective mangrove conservation requires the determination of species identity, management units, and genetic structure. Here, we investigate the genetic distinctiveness and genetic structure of an iconic but yet taxonomically confusing species complex Rhizophora mucronata and R. stylosa across their distributional range, by employing a suite of 20 informative nuclear SSR markers. Results Our results demonstrated the general genetic distinctiveness of R. mucronata and R. stylosa, and potential hybridization or introgression between them. We investigated the population genetics of each species without the putative hybrids, and found strong genetic structure between oceanic regions in both R. mucronata and R. stylosa. In R. mucronata, a strong divergence was detected between populations from the Indian Ocean region (Indian Ocean and Andaman Sea) and the Pacific Ocean region (Malacca Strait, South China Sea and Northwest Pacific Ocean). In R. stylosa, the genetic break was located more eastward, between populations from South and East China Sea and populations from the Southwest Pacific Ocean. The location of these genetic breaks coincided with the boundaries of oceanic currents, thus suggesting that oceanic circulation patterns might have acted as a cryptic barrier to gene flow. Conclusions Our findings have important implications on the conservation of mangroves, especially relating to replanting efforts and the definition of evolutionary significant units in Rhizophora species. We outlined the genetic structure and identified geographical areas that require further investigations for both R. mucronata and R. stylosa. These results serve as the foundation for the conservation genetics of R. mucronata and R. stylosa and highlighted the need to recognize the genetic distinctiveness of closely-related species, determine their respective genetic structure, and avoid artificially promoting hybridization in mangrove restoration programmes.

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