GIPSy: Genomic island prediction software

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GIPSy: Genomic island prediction software

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作者：Siomar C. Soares^a ; ^b ; ^{siomars@gmail.com" class="auth_mail" title="E-mail the corresponding author} ; ^{siomar@icbn.uftm.edu.br" class="auth_mail" title="E-mail the corresponding author} ; Hakan Geyik^b ; ^c ; ^{hakan.geyik@uni-bielefeld.de" class="auth_mail" title="E-mail the corresponding author} ; Rommel T.J. Ramos^d ; ^{rommelramos@ufpa.br" class="auth_mail" title="E-mail the corresponding author} ; Pablo H.C.G. de Sá ; ^d ; ^{pablogomesdesa@gmail.com" class="auth_mail" title="E-mail the corresponding author} ; Eudes G.V. Barbosa^b ; ^e ; ^{eudesgvb@gmail.com" class="auth_mail" title="E-mail the corresponding author} ; Jan Baumbach^e ; ^{jan.baumbach@imada.sdu.dk" class="auth_mail" title="E-mail the corresponding author} ; Henrique C.P. Figueiredo^f ; ^{figueiredoh@yahoo.com" class="auth_mail" title="E-mail the corresponding author} ; Anderson Miyoshi^b ; ^{miyoshi@icb.ufmg.br" class="auth_mail" title="E-mail the corresponding author} ; Andreas Tauch^c ; ^{tauch@cebitec.uni-bielefeld.de" class="auth_mail" title="E-mail the corresponding author} ; Artur Silva^d ; ^{asilva@ufpa.br" class="auth_mail" title="E-mail the corresponding author} ; Vasco Azevedo^b ; ^{vascoariston@gmail.com" class="auth_mail" title="E-mail the corresponding author}
关键词：Genomic islands ; Pathogenicity islands ; Resistance islands ; Symbiotic islands ; Metabolic islands ; Horizontal gene transfer ; Genome plasticity
刊名：Journal of Biotechnology
出版年：2016
出版时间：20 August 2016
年：2016
卷：232
期：Complete
页码：2-11
全文大小：4832 K

文摘

class="label">•: The first life-style-specific GEI prediction software to predict all classes of GEIs.
class="label">•: GIPSy predicted 13 pathogenicity islands of Escherichia coli CFT073.
class="label">•: GIPSy predicted 1 metabolic island of Burkholderia pseudomallei K96243.
class="label">•: GIPSy predicted 1 resistance island of Acinetobacter baumannii AYE.
class="label">•: GIPSy predicted 1 symbiotic island of Mesorhizobium loti MAFF303099.

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