A comparison of DNA extraction protocols from blood spotted on FTA cards for the detection of tick-borne pathogens by Reverse Line Blot hybridization

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• 作者：Zerihun Hailemariam ^{z.negasi@fu-berlin.de} ; Jabbar Sabir Ahmed ^{jabbar.ahmed@gmx.de} ; Peter-Henning Clausen ^{peter-henning.clausen@fu-berlin.de} ; Ard Menzo Nijhof ; ^{ard.nijhof@fu-berlin.de}
• 关键词：DNA extraction ; FTA cards ; Tick-borne pathogens ; Reverse line blot hybridization ; FTA purification reagent ; Chelex
• 刊名：Ticks and Tick-borne Diseases
• 出版年：2017
• 出版时间：January 2017
• 年：2017
• 卷：8
• 期：1
• 页码：185-189
• 全文大小：418 K
• 卷排序：8

文摘

An essential step in the molecular detection of tick-borne pathogens (TBPs) in blood is the extraction of DNA. When cooled storage of blood under field conditions prior to DNA extraction in a dedicated laboratory is not possible, the storage of blood on filter paper forms a promising alternative. We evaluated six DNA extraction methods from blood spotted on FTA Classic® cards (FTA cards), to determine the optimal protocol for the subsequent molecular detection of TBPs by PCR and the Reverse Line Blot hybridization assay (RLB). Ten-fold serial dilutions of bovine blood infected with Babesia bovis, Theileria mutans, Anaplasma marginale or Ehrlichia ruminantium were made by dilution with uninfected blood and spotted on FTA cards. Subsequently, DNA was extracted from FTA cards using six different DNA extraction protocols. DNA was also isolated from whole blood dilutions using a commercial kit. PCR/RLB results showed that washing of 3 mm discs punched from FTA cards with FTA purification reagent followed by DNA extraction using Chelex® resin was the most sensitive procedure. The detection limit could be improved when more discs were used as starting material for the DNA extraction, whereby the use of sixteen 3 mm discs proved to be most practical. The presented best practice method for the extraction of DNA from blood spotted on FTA cards will facilitate epidemiological studies on TBPs. It may be particularly useful for field studies where a cold chain is absent.