The synthesis and characterization of ruthenium(II) complexes, [Ru(cyclam)(bqdi)]·ZnCl
4 (
1·ZnCl
4; cyclam = 1,4,8,11-tetraazacyclotetradecane, bqdi =
o-benzoquinonediimine), [Ru(cyclam)(nqdi)]·(ClO
4)
2 (
2·(ClO
4)
2; nqdi = 2,3-naphthoquinonediimine), and [Ru(cyclam)(phi)]·(ClO
4)
2 (
3·(ClO
4)
2; phi = 9,10-phenanthroquinonediimine), aredescribed. The DNA binding properties and biological activity of the Ru(II) complexes were studied by variousbiophysical and cytological techniques. As expected, only
3 showed significant binding with DNA. The thermodynamicprofile of the binding of
3 and DNA was constructed by analyzing the experimental data of absorption titration andUV melting studies with the McGhee equation, van't Hoff's equation, and the Gibbs-Helmholtz equation. Compound
3 binds double-stranded DNA with a binding constant of 5.0 × 10
4 M
-1 at 20
C, and the binding mode of thecomplex to DNA was proved to be intercalative. Cytotoxicity and induced type of cell death of
1-
3 were alsoinvestigated. Basically, metal complexes with ligands of molecular shape closely related to the structure of DNAare more likely to bind DNA and possess higher toxicity.