用户名: 密码: 验证码:
Molecular identification and systematic assessment of Labidocera madurae A. Scott, 1909 (calanoid copepod) from Lakshadweep Archipelago, southwest coast of India, based on mitochondrial COI gene sequences
详细信息    查看全文
  • 作者:V. F. Sanu ; S. Bijoy Nandan ; J. Deepak ; M. Harikrishnan
  • 关键词:Labidocera madurae ; DNA barcoding ; Lakshadweep ; Calanoid copepods
  • 刊名:Marine Biodiversity
  • 出版年:2016
  • 出版时间:March 2016
  • 年:2016
  • 卷:46
  • 期:1
  • 页码:95-103
  • 全文大小:792 KB
  • 参考文献:Bradford JM, Jillett JB (1980) The marine fauna of New Zealand: pelagic calanoid copepods: family aetideidae. NZ Oceanogr Inst Mem 86:1–102
    Bucklin A, Frost BW, Kocher TD (1995) Molecular systematics of six calanus and three Metridia species (Calanoida: Copepoda). Mar Biol 121:655–664CrossRef
    Bucklin A, Lajeunesse TC, Curre E, Wallinga J, Garrison K (1996a) Molecular genetic diversity of the copepod, Nannocalanus minor: genetic evidence of species and population structure in the N. Atlantic Ocean. J Mar Res 54:285–310CrossRef
    Bucklin A, Sundt R, Dahle G (1996b) Population genetics of Calanus finmarchicus in the North Atlantic. Opelia 44:29–45
    Bucklin A, Wiebe PH (1998) Low mitochondrial diversity and small effective population sizes of the copepods Calanus finmarchicus and Nannocalanus minor: possible impact of climatic variation during recent glaciation. J Hered 89:383–392CrossRef PubMed
    Bucklin A, Hopcroft RR, Kosobokova KN et al (2010) DNA BARCODING of Arctic Ocean holozooplankton for species identification and recognition. Deep Sea Res Pt II 57:40–48
    Conway VP, Rowena GW, Joanna HDC, Christopher PG, David B (2003) Guide to the coastal and surface zooplankton of the south – western Indian Ocean. Marine Biological Association of the United Kingdom, Occasional Publication No. 15: 131
    Davis CC (1955) The marine and freshwater plankton. Michigan State University Press, Michigan
    El-Sherbiny MM, Ueda H (2010) Labidocera boxshalli sp. nov, a new calanoid copepod (Crustacea; Pontellidae) from the Red Sea. Org Divers Evol 10:23–29CrossRef
    Emery AR (1968) Preliminary observations on coral reef plankton. Limnol Oceanogr 13:292–303CrossRef
    Eyun S, Lee Y, Suh HL, Kim S, Soh HY (2007) Genetic identification and molecular phylogeny of Pseudodiaptomus species (Calanoida, Pseudodiaptomidae) in Korean waters. Zool Sci 24:265–271CrossRef PubMed
    Fleminger A (1957) New Calanoid Copepods of Pontella Dana and Labidocera Lubbock with notes on the distribution of this genera in the Gulf of Mexico. Ttilane Stud Zool 5(2):19–34
    Fleminger A (1967) Taxonomy, distribution and polymorphism in the Labidocera jollae group with remarks on evolution within the group (Copepoda: Calanoida). Proc US Natl Mus 120:1–61CrossRef
    Fleminger A, Moore E (1977) Two new species of Labidocera (Copepoda, Calanoida) from the western tropical North Atlantic region. Bull Mar Sci 27:520–529
    Fleminger A, Othman BHR, Greenwood JG (1982) The Labidocera pectinata group: an Indo-West Pacific lineage of planktonic copepods with descriptions of two new species. J Plankton Res 4:245–270CrossRef
    Fleminger A (1986) The Pleistocene equatorial barrier between the Indian and Pacific Oceans and a likely cause for Wallace’s Line. UNESCO Tech Pap Mar Sci 49:84–97
    Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3:294–299PubMed
    Giesbrecht W (1892) Systematik und Faunistik der pelagicschen Copepoden des Golfes von Neapel und der angrenzenden Meeres-Abschnitte. Fauna u Flora Golf Neapel 19: 1–831 pls1-54
    Goetze E (2003) Cryptic speciation on the high seas; global phylogenetics of the copepod family Eucalanidae. Proc R Soc Lond B 270:2321–2331CrossRef
    Gouday R (1967) Note preliminairesur la systematique et la repartition annuelle des copepods deaeauxsuperficielles de tulear (Madagascar). Rec travStn mar Endoume 6:71–100
    Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
    Hassett RP, Boehlert GW (1999) Spatial and temporal distributions of copepods to leeward and windward of Oahu, Hawaiian Archipelago. Mar Biol 134:571–584CrossRef
    Heinrich AK (1960) On the subsurface plankton in the Central Pacific ocean. Trudy Inst Okeanol 41:42–47 (in Russian)
    Jagadeesan L, Jyothibabu R, Anjusha A, Arya PM, Madhu NV, Muraleedharan KR, Sudheesh K (2013) Ocean currents structuring the mesozooplankton in the Gulf of Mannarand the Palk Bay, southeast coast of India. Prog Oceanogr 110:27–48CrossRef
    Jeong HG, Soh HY, Suh HL (2014) Morphological and genetic differentiation of heteromorphy in Labidocera rotunda (Copepoda, Calanoida, Pontellidae). Zootaxa 3764(2):181–191CrossRef PubMed
    Jungbluth MJ, Lenz PH (2013) Copepod diversity in a subtropical bay based on a fragment of the mitochondrial COI gene. J Plankton Res 35(3):630–643CrossRef
    Kasturirangan LR (1963) A key identification of the more common planktonic copepods of Indian waters. CSIR Publ, New Delhi
    Kovalev AV, Shmeleva AA (1982) The fauna of copepods (Copepoda) in the Mediterranean sea. Ekologiya Morya 8:82–87 (in Russian)
    Lakkis S (1981) On the presence of some rare copepods in the Levantine Basin. Proceedings of the first international conference on copepoda: 24–28 August 1981: Amsterdam, The Netherlands. Crustaceana supplement No. 7 pp 286–304
    Lakkis S (1990) Composition, diversitdet successions des copdpodesplanctoniques des eauxlibanaises (Mdditerrande orientate). Oceanol Acta 13(4):489–502
    Lakkis S, Toklu B, Zeidane R and Sarihan E (2005) Importance of copepods in the zooplankton community of Iskenderoun Bay (North eastern Mediterranean). 9th Int conf on copepoda. Tunis
    Lee CE, Frost BW (2002) Morphological stasis in the Eurytemora affinis species complex (Copepoda: Temoridae). Hydrobiologia 480:111–128CrossRef
    Leis JM (1982) Nearshore distributional gradients of larval fish (15taxa) and planktonic crustaceans (6 Taxa) in Hawaii. Mar Biol 72:89–97CrossRef
    Lubbock J (1853) On two new subgenera of Calanoida. Ann Mag Nat Hist 11(2):202–209CrossRef
    Madhupratap M, Haridas P (1986) Epipelagic calanoid copepods of the northern Indian Ocean. Oceanol Acta 9:105–117
    Madhupratap M, Achuthankutty CT, Sreekumaran Nair SR (1991) Zooplankton of the lagoons of the Laccadives: diel patterns and emergence. J Plankton Res 13:947–958CrossRef
    Mori T (1964) The pelagic Copepoda from the neighboring waters of Japan. The soyo company inc, Japan, pp 90–91
    Mulyadi (1997) Three new species of Pontellidae (Copepoda: Calanoida) from coastal waters of Java. Crustaceana 70:653–675CrossRef
    Mulyadi (2002) The calanoid copepod family Pontellidae from Indonesian waters, with notes on its species-groups. Treubia 332:1–167
    Mulyadi (2003) Three new species of Pontella (Copepoda, Calanoida) from Indonesian waters, with notes on their species groups. Crustaceana 76:385–402CrossRef
    Omori M, Ikeda T (1984) Methods in marine zooplankton ecology, A Wiley Interscience Publication. Wiley, United States
    Othman BHR (1986) A new species of Labidocera (Copepoda, Calanoida) from Peninsular Malaysia. Malay Nat J 39:193–201
    Pillai PP (1975) On the species of Pontella Dana and Pontellopsis Brady of the international Indian ocean expedition collections (1960–1965). J Mar Biol Assoc India 17:129–146
    Razouls C, de Bovee F, Kouwenberg J (2013) Diversity and geographical distribution of marine planktonic copepods. Available at http://​copepodes.​obs-banyuls.​fr/​en . Accessed 24 Nov, 2014
    Ryuji JM, Masaki UM, Matsumi N, Shuhei N (2002) Complete mitochondrial DNA sequence of Tigriopus japonicas (crustacea: copepoda). Mar Biotechnol 4:406–417CrossRef
    Scott A (1909) Free swimming, littoral and semi-parasitic copepoda. Sibogaexped Mon 18a 1–323 1–69
    Sewell RBS (1932) The Copepoda of Indian Seas. Calanoida Mem Indian Mus 10:223–407
    Sherman K (1963) Pontellid Copepod distribution in relation to surface water types in the Central North Pacific. Limnol Oceanogr 8(2):214–227CrossRef
    Sherman K (1964) Pontellid copepod occurrence in the central South Pacific. Limnol Oceanogr 9:476–484CrossRef
    Sherman K (1967) A redescription of the calanoid copepod, pontellavalidadana, from the central South Pacific. Crustaceana 13(1):20–30CrossRef
    Silas EG, Pillai PP (1973) The calanoid copepod family Pontellidae from the Indian Ocean. J Mar Biol Assoc India 15(2):771–858
    Soh HY, Kwon SW, Lee W, Yoon YH (2012) A new Pseudodiaptomus (Copepoda, Calanoida) from Korea supported by molecular data. Zootaxa 3368:229–244
    Tait RV (1981) Elements of marine ecology. Third edition, Butterworths London des especesnovuvelles. Bull Instoceanogr Monaco
    Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739CrossRef PubMed PubMedCentral
    Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882CrossRef PubMed PubMedCentral
    Todd CD, Laverack MS (1991) Coastal marine zooplankton: a practical manual for students. Cambridge University Press, Cambridge
    Voronina NM (1962) On the surface plankton of the Indian Ocean. Traudy Inst Okeanol 58:67–79
  • 作者单位:V. F. Sanu (1)
    S. Bijoy Nandan (1)
    J. Deepak (2)
    M. Harikrishnan (2)

    1. Department of Marine Biology, Microbiology and Biochemistry, School of Marine Sciences, Cochin University of Science and Technology, Ernakulam, Kerala, India
    2. School of Industrial Fisheries, Cochin University of Science and Technology, Ernakulam, Kerala, India
  • 刊物主题:Biodiversity; Freshwater & Marine Ecology; Plant Systematics/Taxonomy/Biogeography; Animal Systematics/Taxonomy/Biogeography;
  • 出版者:Springer Berlin Heidelberg
  • ISSN:1867-1624
文摘
Labidocera madurae A. Scott, 1909, belonging to the family Pontellidae, may easily be mistaken for Labidocera pavo Giesbrecht 1889 or Labidocera bataviae A. Scott, 1909. L. madurae is distinguishable from its congeners by the presence of a moderately large and asymmetrical genital segment, with the middle of the right side considerably inflated and with a short anal segment in females, and a short, curved, thumb-like process on the proximal outer margin of the first joint of the right exopodite of the fifth pair of feet, the apical joint of left exopodite elongate and ovate, and twice as long as broad in males. Since Labidocera individuals exhibit close proximity in morphology, there exists the potential for misidentification. Intraspecific distance of L. madurae sequences developed in the present study ranged from 0.2 to 0.9 %, which was adequate to confirm the genetic congruence of the same. This study also supported the differentiation of Labidocera madurae from other individuals of the genus Labidocera. A point of major confusion concerning L. madurae and Labidocera sp. from the Hawaiian region was resolved in this study, as is evident from the molecular inference that L. madurae and Labidocera sp. individuals were the descendants of a common ancestor and close relatives to other individuals within the genus. The present database represents the first molecular data for L. madurae, which will be adaptable for resolving taxonomic ambiguities and inferring phylogenetic relationships of the genus Labidocera.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700