Development, characterization, segregation, and mapping of microsatellite markers for European hazelnut (Corylus avellana L.) from enriched genomic libraries and usefulness in genetic diversity studies

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• 作者：Kahraman Gürcan (1)
  Shawn A. Mehlenbacher (1)
  Roberto Botta (2)
  Paolo Boccacci (2)
  
• 关键词：Simple sequence repeat ; Filbert ; Genetic diversity
• 刊名：Tree Genetics & Genomes
• 出版年：2010
• 出版时间：July 2010
• 年：2010
• 卷：6
• 期：4
• 页码：513-531
• 全文大小：275KB
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• 作者单位：Kahraman Gürcan (1)
  Shawn A. Mehlenbacher (1)
  Roberto Botta (2)
  Paolo Boccacci (2)
  
  1. Department of Horticulture, Oregon State University, 4017 ALS Building, Corvallis, OR, 97331, USA
  2. Dipartimento di Colture Arboree, Università degli Studi di Torino, Via Leonardo da Vinci 44, 10095, Grugliasco, Torino, Italy
  

文摘

Eighty-six new microsatellite loci were developed for European hazelnut (Corylus avellana L.) by screening two genomic libraries enriched for dinucleotide repeats. The loci, 73 developed from a GA-enriched library and 13 from a CA-enriched library, showed a high level of polymorphism in 50 accessions. The number of alleles per locus ranged from five to 21, with a mean of 10.55. Mean values for expected heterozygosity, observed heterozygosity, and polymorphism information content were high, averaging 0.76, 0.69, and 0.73, respectively. In a mapping population, loci segregated 1:1, 1:2:1, and 1:1:1:1. Segregation distortion and null alleles were observed at some loci. Eighty-one of the 86 loci were assigned to linkage groups. A neighbor-joining dendrogram reflected great diversity among the 50 accessions and showed clustering by geographic origin.