作者： Yoshito Hirata ; Kai Morino ; Taiji Suzuki ; Qian Guo…

关键词：mathematical medicine ; dynamical model ; parameter estimation

刊名：Quantitative Biology

出版年：2016

作者：Patrick J. Coskren (1) (2)
Jennifer I. Luebke (2) (3)
Doron Kabaso (1) (2) (5)
Susan L. Wearne (1) (2)
Aniruddha Yadav (1) (2) (6)
Timothy Rumbell (1) (2)
Patrick R. Hof (1) (2)
Christina M. Weaver (2) (4)

1. Fishberg Department of Neuroscience and Friedman Brain Institute ; Icahn School of Medicine at Mount Sinai ; New York ; NY ; 10029 ; USA
2. Computational Neurobiology and Imaging Center ; Icahn School of Medicine at Mount Sinai ; New York ; NY ; 10029 ; USA
3. Department of Anatomy and Neurobiology ; Boston University School of Medicine ; Boston ; MA ; 02118 ; USA
5. BARN-ICT Ltd ; Binyamina ; Israel
6. Gauge Data Solutions Pvt Ltd ; Noida ; India
4. Department of Mathematics and Computer Science ; Franklin and Marshall College ; P.O. Box 3003 ; Lancaster ; PA ; 17604 ; USA

关键词：Neuronal excitability ; Dendrites ; Spines ; Morphology ; Compartment model ; Aging ; Rhesus monkey ; Passive parameters

刊名：Journal of Computational Neuroscience

出版年：2015

作者：Gustavo J. Volpe (1)
Patricia Rizzi (1)
Marcelo S. Nacif (1) (2)
Erin P. Ricketts (9)
Bharath Ambale Venkatesh (9)
Chia-Ying Liu (2)
Antoinette S. Gomes (3)
W. Gregory Hundley (4)
Martin R. Prince (5)
James C. Carr (6)
Robyn L. McClelland (7)
Kiang Liu (8)
John Eng (9)
W. Craig Johnson (7)
Raimond L. Winslow (10) (11)
David A. Bluemke (1) (2)
Jo茫o A. C. Lima (1)

1. Division of Cardiology ; Johns Hopkins University School of Medicine ; 600 N Wolfe Street ; Blalock 524 ; Baltimore ; MD ; 21287 ; USA
2. Radiology and Imaging Sciences ; National Institutes of Health Clinical Center ; Bethesda ; MD ; USA
9. Department of Radiology ; Johns Hopkins University School of Medicine ; Baltimore ; MD ; USA
3. Department of Radiology ; UCLA School of Medicine ; Los Angeles ; CA ; USA
4. Department of Internal Medicine and Radiology ; Wake Forest University School of Medicine ; Winston-Salem ; NC ; USA
5. Cornell MRI ; Cornell and Columbia Universities ; New York ; NY ; USA
6. Division of Radiology ; Northwestern University Medical School ; Chicago ; IL ; USA
7. Department of Biostatistics ; University of Washington ; Seattle ; WA ; USA
8. Department of Preventive Medicine ; Northwestern University Medical School ; Chicago ; IL ; USA
10. Institute for Computational Medicine ; Johns Hopkins University School of Medicine ; Baltimore ; MD ; USA
11. Biomedical Engineering ; Johns Hopkins University School of Medicine ; Baltimore ; MD ; USA

关键词：Cardiac magnetic resonance ; Quality control ; Heart function ; Tissue characterization

刊名：Current Cardiovascular Imaging Reports

出版年：2015

作者：Xin Wang (1) (2)
Adrian M. Dubuc (1) (2)
Vijay Ramaswamy (1) (2) (3)
Stephen Mack (1) (2)
Deena M. A. Gendoo (4)
Marc Remke (1) (2)
Xiaochong Wu (1)
Livia Garzia (1)
Betty Luu (1)
Florence Cavalli (1)
John Peacock (1) (2)
Borja L贸pez (1)
Patryk Skowron (1) (2)
David Zagzag (5)
David Lyden (6)
Caitlin Hoffman (1) (7)
Yoon-Jae Cho (8)
Charles Eberhart (9)
Tobey MacDonald (10)
Xiao-Nan Li (11)
Timothy Van Meter (12)
Paul A. Northcott (13)
Benjamin Haibe-Kains (14) (4)
Cynthia Hawkins (15)
James T. Rutka (7)
Eric Bouffet (3)
Stefan M. Pfister (13)
Andrey Korshunov (16)
Michael D. Taylor (1) (7)

1. Developmental and Stem Cell Biology Program ; The Hospital for Sick Children ; University of Toronto ; Toronto ; ON ; Canada
2. Department of Laboratory Medicine and Pathobiology ; University of Toronto ; Toronto ; ON ; Canada
3. Division of Haematology/Oncology ; Hospital for Sick Children ; Toronto ; ON ; Canada
4. Bioinformatics and Computational Genomics Laboratory ; Princess Margaret Cancer Centre ; University Health Network ; Toronto ; ON ; Canada
5. Departments of Pathology and Neurosurgery ; NYU Langone Medical Center ; New York ; NY ; USA
6. Departments of Pediatrics ; Cell and Developmental Biology ; Weill Medical College of Cornell University ; New York ; NY ; USA
7. Division of Neurosurgery ; Hospital for Sick Children ; 555 University Ave ; Ste 1503 ; Toronto ; ON ; M5C 1X8 ; Canada
8. Department of Neurology and Neurological Sciences ; Stanford University School of Medicine ; Stanford ; CA ; USA
9. Departments of Pathology ; Ophthalmology and Oncology ; John Hopkins University School of Medicine ; Baltimore ; MD ; USA
10. Pediatric Neuro-Oncology Program ; Emory University School of Medicine ; Atlanta ; GA ; USA
11. Department of Pediatrics ; Brain Tumor Program ; Children鈥檚 Cancer Center ; Baylor College of Medicine ; Houston ; TX ; USA
12. Department of Pediatrics ; Virginia Commonwealth University School of Medicine ; Richmond ; VA ; USA
13. Division of Pediatric Neurooncology ; Department of Pediatric Hematology and Oncology ; German Cancer Consortium (DKTK) ; German Cancer Research Center (DKFZ) ; Heidelberg University Hospital ; Heidelberg ; Germany
14. Department of Medical Biophysics ; University of Toronto ; Toronto ; ON ; Canada
15. Department of Pathology ; Hospital for Sick Children ; Toronto ; ON ; Canada
16. Clinical Cooperation Unit Neuropathology ; German Cancer Research Center (DKFZ) ; Heidelberg ; Germany

关键词：Medulloblastoma ; Metastasis ; Molecular subgroups ; Integrative genomics ; Gene expression ; DNA methylation

刊名：Acta Neuropathologica

出版年：2015

作者：Muneesh Tewari (1)

1. Departments of Internal Medicine and Bioengineering ; Biointerfaces Institute and Center for Computational Medicine and Bioinformatics ; University of Michigan ; 109 Zina Pitcher Place ; 4029 BSRB ; SPC 2200 ; Ann Arbor ; MI ; 48109-2200 ; USA

刊名：Genome Biology

出版年：2015

作者：Alessandro Romanel (1)
Sara Lago (1)
Davide Prandi (1)
Andrea Sboner (2) (3) (4)
Francesca Demichelis (1) (3) (4)

1. Centre for Integrative Biology (CIBIO) ; University of Trento ; Trento ; Italy
2. Department of Pathology and Laboratory Medicine ; Weill Cornell Medical College ; New York ; USA
3. Institute for Computational Biomedicine ; Weill Cornell Medical College ; New York ; USA
4. Institute for Precision Medicine ; Weill Cornell Medical College & New York Presbyterian Hospital ; New York ; USA

关键词：Allele ; specific features ; Parallel computation ; Genome analysis ; Transcriptome analysis ; Next ; generation sequencing ; SNPs

刊名：BMC Medical Genomics

出版年：2015

作者：Ki Moo Lim (1)
Seung-Bae Hong (2)
Byong Kwon Lee (3)
Eun Bo Shim (2)
Natalia Trayanova (4)

1. Department of Medical IT Convergence Engineering ; Kumoh National Institute of Technology ; Gumi ; Republic of Korea
2. Department of Mechanical and Biomedical Engineering ; Kangwon National University ; 1 Kangwondaehak-gil ; Chuncheon-Si ; Gangwon-do ; 200-701 ; Republic of Korea
3. Department of Cardiology ; Yonsei University Hospital ; Seoul ; Republic of Korea
4. Institute for Computational Medicine and the Department of Biomedical Engineering ; Johns Hopkins University ; Baltimore ; MD ; 21218 ; USA

关键词：Valve regurgitation ; Cardiac electromechanical model ; Regurgitant volume ; Stroke work

刊名：The Journal of Physiological Sciences

出版年：2015

作者：Jishnu Das (1) (2)
Kaitlyn M Gayvert (3)
Florentina Bunea (4)
Marten H Wegkamp (4)
Haiyuan Yu (1) (2)

1. Department of Biological Statistics and Computational Biology ; Cornell University ; 335 Weill Hall ; Ithaca ; NY ; 14853 ; USA
2. Weill Institute for Cell and Molecular Biology ; Cornell University ; Ithaca ; NY ; 14853 ; USA
3. Tri-Institutional Training Program in Computational Biology and Medicine ; New York ; NY ; 10065 ; USA
4. Department of Statistical Science ; Cornell University ; Ithaca ; NY ; 14853 ; USA

关键词：Cancer genomics ; Gene expression ; Protein interaction network ; Prognosis prediction ; Elastic net

刊名：BMC Genomics

出版年：2015

作者：Ha X Dang (1) (4)
Barry Pryor (2)
Tobin Peever (3)
Christopher B Lawrence (1) (3)

1. Department of Biological Sciences ; Virginia Tech ; Blacksburg ; Virginia ; 24061 ; USA
4. Current address ; Department of Internal Medicine ; Division of Oncology ; and The Genome Institute ; Washington University School of Medicine ; St. Louis ; MO ; 63110 ; USA
2. Department of Plant Sciences ; University of Arizona ; Tucson ; Arizona ; 85721 ; USA
3. Department of Plant Pathology ; Washington State University ; Pullman ; Washington ; 99164 ; USA

关键词：Database ; Alternaria ; Fungal genome ; Sequence ; Annotation ; Comparative genomics ; Plant pathogen ; Allergy ; Saprophyte

刊名：BMC Genomics

出版年：2015

作者：Stefan Canzar (5) (6)
Sandro Andreotti (7)
David Weese (7)
Knut Reinert (7)
Gunnar W. Klau (8)

5. Center for Computational Biology ; Johns Hopkins University School of Medicine ; Baltimore ; MD ; 21205 ; USA
6. Toyota Technological Institute at Chicago ; Chicago ; IL ; 60637 ; USA
7. Department of Mathematics and Computer Science ; Institute of Computer Science ; Freie Universit盲t Berlin ; Arnimallee 14 ; 14195 ; Berlin ; Germany
8. Life Sciences ; Centrum Wiskunde & Informatica (CWI) ; Science Park 123 ; 1098 XG ; Amsterdam ; The Netherlands

刊名：Lecture Notes in Computer Science

出版年：2015