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1.
Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot
transcriptome
作者:
Erik A. Visser
;
Jill L. Wegrzyn
;
Emma T. Steenkmap
;
Alexander A. Myburg…
关键词:
Pinus patula
;
De novo
transcriptome
assembly
;
Genome guided
transcriptome
assembly
;
RNA
;
seq
刊名:BMC Genomics
出版者:BioMed Central
年:2015
2.
SNP discovery and Characterization from
transcriptome
s of Asian yellow pond turtle, Mauremys mutica
作者:
Jian Zhao
;
Xincheng Zhang
;
Wei Li
;
Kunci Chen…
关键词:
Mauremys mutica
;
Asian yellow pond turtle
;
SNP
;
Transcriptome
刊名:Conservation Genetics Resources
出版者:Springer Netherlands
年:2016
3.
De novo sequencing, assembly, and analysis of the Taxodium ‘Zhongshansa-roots and shoots
transcriptome
in response to short-term waterlogging
作者:
Baiyan Qi
;
Ying Yang
;
Yunlong Yin
;
Meng Xu
;
Huogen Li
关键词:
Taxodium
;
Waterlogging
;
Stress
;
Transcriptome
;
qRT
;
PCR
刊名:BMC Plant Biology
出版者:BioMed Central
年:2014
4.
Genomic resources for a model in adaptation and speciation research: characterization of the Poecilia mexicana
transcriptome
作者:
Joanna L Kelley (1) Courtney N Passow (2) Martin Plath (3) Lenin Arias Rodriguez (4) Muh-Ching Yee (1) Michael Tobler (2)
关键词:
De novo assembly
;
Ecological speciation
;
Expression analysis
;
Poeciliidae
;
RNA sequencing
;
Transcriptome
刊名:BMC Genomics
年:2012
5.
Development of 20 microsatellite markers for kuruma shrimp (Marsupenaeus japonicus) using illumina sequencing
作者:
Shengping Zhong
;
Yongquan Su
;
Yong Mao
;
Min Liu…
关键词:
Marsupenaeus japonicus
;
Transcriptome
sequencing
;
Microsatellite
;
Conservation
;
Decapoda
刊名:Conservation Genetics Resources
出版者:Springer Netherlands
年:2015
6.
An RNA sequencing
transcriptome
analysis of the high-temperature stressed tall fescue reveals novel insights into plant thermotolerance
作者:
Tao Hu
;
Xiaoyan Sun
;
Xunzhong Zhang
;
Eviatar Nevo
;
Jinmin Fu
关键词:
High
;
temperature stress
;
RNA sequencing
;
Cell cycle
;
Energy metabolism
;
Tall fescue
刊名:BMC Genomics
出版者:BioMed Central
年:2014
7.
Genomic and transcriptomic analysis of carbohydrate utilization by Paenibacillus sp. JDR-2: systems for bioprocessing plant polysaccharides
作者:
Neha Sawhney
;
Casey Crooks
;
Virginia Chow
;
James F. Preston…
关键词:
Paenibacillus sp. JDR
2 ;
Xylans
;
Soluble β
;
glucan
;
Starch
;
Bioprocessing systems
;
Transcriptome
;
RNA sequencing
;
Biofuels and chemicals
刊名:BMC Genomics
出版者:BioMed Central
年:2016
8.
RNA-seq analysis in forest tree species: bioinformatic problems and solutions
作者:
Unai López de Heredia
;
José Luis Vázquez-Poletti
关键词:
Cloud computing
;
De novo assembly
;
Differential expression
;
Functional annotation
;
RNA
;
seq
;
Transcriptome
刊名:Tree Genetics & Genomes
出版者:Springer Berlin Heidelberg
年:2016
9.
Potential functions of microRNAs in starch metabolism and development revealed by miRNA
transcriptome
profiling of cassava cultivars and their wild progenitor
作者:
Xin Chen (1) (2) Jing Xia (3) (4) Zhiqiang Xia (1) (2) Hefang Zhang (1) (2) Changying Zeng (1) (2) Cheng Lu (1) (2) Weixiong Zhang (3) (4) Wenquan Wang (1) (2) 1. The Institute of Tropical Bioscience and Biotechnology (ITBB)
;
Chinese Academy of Tropical Agricultural Sciences (CATAS)
;
Haikou
;
571101
;
PR China 2. Key Laboratory of Biology and Genetic Resources of Tropical Crops
;
Ministry of Agriculture
;
Haikou
;
571101
;
PR China 3. Institute for Systems Biology
;
Jianghan University
;
Wuhan
;
430056
;
China 4. Department of Computer Science and Engineering
;
Washington University in St. Louis
;
St. Louis
;
Missouri
;
MO
;
63130
;
USA
关键词:
MicroRNA
;
Target Gene
;
Wild Progenitor
;
Cassava (Manihot esculenta Crantz)
刊名:BMC Plant Biology
出版者:BioMed Central
年:2015
10.
Transcriptome
analysis of two buffalograss cultivars
作者:
Michael Wachholtz (7) Tiffany Heng-Moss (6) Paul Twigg (6) Lisa Baird (7) Guoqing Lu (7) Keenan Amundsen (7)
关键词:
Buffalograss
;
Transcriptome
;
Next
;
generation sequencing
刊名:BMC Genomics
年:2013
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