作者：Takanori Hasegawa (1)
Tomoya Mori (1)
Rui Yamaguchi (2)
Teppei Shimamura (3)
Satoru Miyano (2)
Seiya Imoto (2)
Tatsuya Akutsu (1)

1. Bioinformatics Center ; Institute for Chemical Research ; Kyoto University ; Gokasho ; Kyoto ; 611-0011 Uji ; Japan
2. Human Genome Center ; The Institute of Medical Science ; The University of Tokyo ; 4-6-1 Shirokanedai ; Tokyo ; 108-8639 Minato-ku ; Japan
3. Division of Systems Biology ; Nagoya University Graduate School of Medicine ; 65 Tsurumai-cho ; Nagoya ; 466-8550 Showa-ku ; Japan

关键词：Gene regulatory networks ; Time series analysis ; Systems biology ; Data assimilation ; Monte Carlo

刊名：BMC Systems Biology

出版年：2015

作者：Marie JJ Huysman (1) (2) (3) (4)
Atsuko Tanaka (4) (5)
Chris Bowler (4)
Wim Vyverman (3)
Lieven De Veylder (1) (2)

1. Department of Plant Systems Biology ; Flanders Institute for Biotechnology (VIB) ; 9052 ; Ghent ; Belgium
2. Department of Plant Systems Biology ; VIB ; and Bioinformatics ; Ghent University ; 9052 ; Ghent ; Belgium
3. Protistology and Aquatic Ecology ; Department of Biology ; Ghent University ; 9000 ; Ghent ; Belgium
4. Environmental and Evolutionary Genomics Section ; Institut de Biologie de l鈥橢cole Normale Sup茅rieure ; Centre National de la Recherche Scientifique ; Unit茅 Mixte de Recherche 8186 ; Institut National de la Sant茅 et de la Recherche M茅dicale U1024 ; Ecole Normale Sup茅rieure ; 75230 ; Paris ; Cedex 05 ; France
5. Current address ; Muroran Marine Station ; Field Science Center for Northern Biosphere ; Hokkaido University ; Muroran ; Hokkaido ; 051-0013 ; Japan

关键词：Cyclin ; dependent kinase ; CDKA2 ; Cell cycle ; Cell division ; Cytokinesis ; Diatom ; Mitosis ; Phaeodactylum tricornutum

刊名：BMC Plant Biology

出版年：2015

作者：Masayuki Hamakawa (1)
Takayuki Uozumi (1)
Naoko Ueda (2)
Yuichi Iino (3)
Takaaki Hirotsu (1) (2) (4) (5)

1. Graduate School of Systems Life Sciences ; Kyushu University ; Fukuoka ; 812-8581 ; Japan
2. Department of Biology ; Faculty of Sciences ; Kyushu University ; Fukuoka ; 812-8581 ; Japan
3. Department of Biophysics and Biochemistry ; Graduate School of Science ; The University of Tokyo ; Tokyo ; 113-0033 ; Japan
4. Department of Biology ; Graduate School of Sciences ; Kyushu University ; 6-10-1 Hakozaki ; Higashi-ku ; Fukuoka ; 812-8581 ; Japan
5. Division of Applied Medical Sensing ; Research and Development Center for Taste and Odor Sensing ; Kyushu University ; Fukuoka ; 819-0395 ; Japan

关键词：C. elegans ; Exploratory behavior ; Glutamate receptor ; RNAi method ; The Ras ; MAPK pathway

刊名：BMC Biology

出版年：2015

作者：Takahide Ota (1)
Masayo Maeda (2)
Mayumi Okamoto (3)
Masaaki Tatsuka (3)

1. Division of Tumor Biology ; Department of Life Science ; Medical Research Institute ; Kanazawa Medical University ; Uchinada ; Ishikawa ; 920-0293 ; Japan
2. Department of Chemistry ; Kanazawa Medical University ; Uchinada ; Ishikawa ; 920-0293 ; Japan
3. Department of Life Sciences ; Life and Environmental Sciences ; Prefectural University of Hiroshima ; Nanatsuka ; Shoubara ; Hiroshima ; 727-0023 ; Japan

关键词：RhoGDI ; Rho GTPases ; Ordinary differential equation ; GAPs ; GEFs

刊名：BMC Systems Biology

出版年：2015

作者：Hiroshi Yajima (29)
Makoto Suzuki (30)
Haruki Ochi (31)
Keiko Ikeda (29)
Shigeru Sato (29)
Ken-ichi Yamamura (32)
Hajime Ogino (33)
Naoto Ueno (30)
Kiyoshi Kawakami (29)

29. Division of Biology ; Center for Molecular Medicine ; Jichi Medical University ; 3311-1 Yakushiji ; Shimotsuke ; Tochigi ; 329-0498 ; Japan
30. Division of Morphogenesis ; Department of Developmental Biology ; National Institute for Basic Biology ; 38 Nishigonaka ; Myodaiji ; Okazaki ; Aichi ; 444-8585 ; Japan
31. Faculty of Medicine ; Yamagata University ; 2-2-2 Iida-Nishi ; Yamagata ; 990-9585 ; Japan
32. Division of Developmental Genetics ; Center for Animal Resources and Development ; Institute of Resource Development and Analysis ; Kumamoto University ; 2-2-1 Honjo ; Kumamoto ; 860-0811 ; Japan
33. Department of Animal Bioscience ; Nagahama Institute of Bio-Science and Technology ; 1266 Tamura ; Nagahama ; Shiga ; 526-0829 ; Japan

关键词：Dorsal root ganglia ; Enhancer ; Evolution ; Neural crest cell ; Rohon ; Beard cell ; Sensory neuron ; Six genes

刊名：BMC Biology

出版年：2014

作者：Seiji Watanabe (1) (3)
Natsumi Ageta-Ishihara (2)
Shinji Nagatsu (3) (4)
Keizo Takao (5) (6) (9)
Okiru Komine (1) (3)
Fumito Endo (1) (3)
Tsuyoshi Miyakawa (5) (6) (7) (9)
Hidemi Misawa (4)
Ryosuke Takahashi (8) (9)
Makoto Kinoshita (2) (9)
Koji Yamanaka (1) (3) (9)

1. Department of Neuroscience and Pathobiology ; Research Institute of Environmental Medicine ; Nagoya University ; Furo-cho ; Chikus ; Nagoya ; 464-8601 ; Japan
3. Laboratory for Motor Neuron Disease ; RIKEN Brain Science Institute ; Wako ; Saitama ; Japan
2. Department of Molecular Biology ; Division of Biological Sciences ; Nagoya University Graduate School of Science ; Furo-cho ; Chikusa ; Nagoya ; 464-8602 ; Japan
4. Department of Pharmacology ; Faculty of Pharmacy ; Keio University ; Tokyo ; Japan
5. Center for Genetic Analysis of Behavior ; National Institute for Physiological Sciences ; Okazaki ; Japan
6. Genetic Engineering and Functional Genomics Group ; Frontier Technology Center ; Kyoto University Graduate School of Medicine ; Kyoto ; Japan
9. CREST (Core Research for Evolutionary Science and Technology) ; JST (Japan Science and Technology Agency) ; Kawaguchi ; Japan
7. Division of Systems Medical Science ; Institute for Comprehensive Medical Science ; Fujita Health University ; Toyoake ; Japan
8. Department of Neurology ; Kyoto University Graduate School of Medicine ; Kyoto ; Japan

关键词：Sirtuin 1 (SIRT1) ; Cu/Zn ; superoxide dismutase (SOD1) ; Heat shock factor 1 (HSF1) ; Heat shock protein (HSP) ; Amyotrophic lateral sclerosis (ALS) ; Systematic behavioral screening

刊名：Molecular Brain

出版年：2014

作者：Ryuta Fujioka (1)
Takenobu Nii (1)
Akiko Iwaki (1)
Atsushi Shibata (1)
Isao Ito (2)
Kiyoyuki Kitaichi (3) (4)
Masatoshi Nomura (5)
Satoko Hattori (6) (7)
Keizo Takao (7) (8)
Tsuyoshi Miyakawa (6) (7) (8)
Yasuyuki Fukumaki (1)

1. Division of Human Molecular Genetics ; Research Center for Genetic Information ; Medical Institute of Bioregulation ; Fukuoka ; 812-8582 ; Japan
2. Department of Biology ; Faculty of Science ; Kyushu University ; Fukuoka ; 812-8581 ; Japan
3. Department of Pharmacology ; Nagasaki International University ; Sasebo ; 859-3298 ; Japan
4. Department of Pharmacology ; Gifu University Hospital ; Gifu ; 501-1194 ; Japan
5. Department of Medicine and Bioregulatory Science ; Graduate School of Medical Science ; Kyushu University ; Fukuoka ; 812-8582 ; Japan
6. Division of Systems Medical Science ; Institute for Comprehensive Medical Science ; Fujita Health University ; Toyoake ; 470-1192 ; Japan
7. CREST ; Japan Science and Technology Agency ; Kawaguchi ; 332-0012 ; Japan
8. Section of Behavior Patterns ; Center for Genetic Analysis of Behavior ; National Institute for Physiological Sciences ; Okazaki ; 444-8787 ; Japan

关键词：Metabotropic glutamate receptors ; Grm3 ; Knockout mice ; Working memory ; Reference memory ; Contextual memory ; Hyperactivity ; LTP ; Microdialysis ; Schizophrenia

刊名：Molecular Brain

出版年：2014

作者：Kenji Nakahigashi (16)
Yuki Takai (16)
Yuh Shiwa (17) (18)
Mei Wada (16)
Masayuki Honma (16)
Hirofumi Yoshikawa (17) (19)
Masaru Tomita (16) (20)
Akio Kanai (16) (20)
Hirotada Mori (21)

16. Institute for Advanced Biosciences ; Keio University ; Tsuruoka ; Yamagata ; 997-0017 ; Japan
17. Genome Research Center ; NODAI Research Institute ; Tokyo University of Agriculture ; 1-1-1 Sakuragaoka Setagaya-ku ; Tokyo ; 156-8502 ; Japan
18. Division of Biobank and Data Management ; Iwate Tohoku Medical Megabank Organization ; Iwate Medical University Disaster Reconstruction Center ; 2-1-1 Nishitokuda ; Yahaba-cho ; Shiwa-gun ; Iwate ; 028-3694 ; Japan
19. Department of Bioscience ; Tokyo University of Agriculture ; 1-1-1 Sakuragaoka Setagaya-ku ; Tokyo ; 156-8502 ; Japan
20. Systems Biology Program ; Graduate School of Media and Governance ; Keio University ; Fujisawa ; 252-8520 ; Japan
21. Graduate School of Biological Sciences ; Nara Institute of Science and Technology ; Ikoma ; Nara ; 630-0101 ; Japan

关键词：Ribosome profiling ; Codon usage ; Codon preference ; Chloramphenicol ; Translation efficiency

刊名：BMC Genomics

出版年：2014

作者：Katrina J Allen (1) (2) (3)
Paul J Turner (4) (5)
Ruby Pawankar (6)
Stephen Taylor (7)
Scott Sicherer (8)
Gideon Lack (10) (9)
Nelson Rosario (11)
Motohiro Ebisawa (12)
Gary Wong (13)
E N Clare Mills (3)
Kirsten Beyer (14)
Alessandro Fiocchi (15)
Hugh A Sampson (8)

1. Murdoch Childrens Research Institute ; Department of Allergy and Immunology ; The University of Melbourne ; Melbourne ; Australia
2. Department of Paediatrics ; Royal Children鈥檚 Hospital ; Parkville ; Australia
3. Institute of Inflammation and Repair ; Manchester Academic Health Sciences Centre ; Manchester Institute of Biotechnology ; The University of Manchester ; Manchester ; UK
4. Section of Paediatrics ; Allergy and Infectious Diseases ; MRC and Asthma UK Centre in Allergic Mechanisms of Asthma ; Imperial College London ; London ; UK
5. Division of Paediatrics & Child Health ; University of Sydney ; Sydney ; Australia
6. Division of Allergy ; Department of Pediatrics ; Nippon Medical School ; 1-1-5 ; Sendagi ; Bunkyo-ku ; Tokyo ; 113-8603 ; Japan
7. Food Allergy Research & Resource Program ; Department of Food Science & Technology ; University of Nebraska ; Lincoln ; NE ; USA
8. Division of Allergy and Immunology ; Department of Pediatrics ; Jaffe Food Allergy Institute ; Icahn School of Medicine at Mount Sinai ; New York ; NY ; USA
10. Children鈥檚 Allergy Unit ; Guy鈥檚 and St. Thomas鈥?NHS Foundation Trust ; London ; UK
9. Division of Asthma ; Allergy and Lung Biology ; MRC and Asthma UK Centre in Allergic Mechanisms of Asthma ; King鈥檚 College London ; London ; UK
11. University of Parana ; Curitiba ; Brazil
12. Department of Allergy ; Clinical Research Center for Allergy and Rheumatology ; Sagamihara National Hospital ; Tokyo ; Japan
13. Department of Paediatrics and School of Public Health ; Chinese University of Hong Kong ; Shatin ; Hong Kong
14. Department of Pediatric Pneumology and Immunulogy ; Charit茅 Universit盲tsmedizin Berlin ; Berlin ; Germany
15. Hospital Bambino Ges霉 ; Vatican City ; Rome ; Italy

关键词：Allergen labelling ; Food allergy ; Legislation ; Precationary allergen labelling ; Anaphylaxis ; Allergen avoidance ; Mandatory labelling

刊名：World Allergy Organization Journal

出版年：2014